RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 TMEM185BQ9H7F4 350 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 POLE3Q9NRF9 147 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 VDAC3Q9Y277 283 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 INMT-MINDY4F8WBC2 141 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 H3BML4 177 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 APOC1P02654 83 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 FOLR3P41439 243 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 GLP1RP43220 463 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 MAT1AQ00266 395 aaKnown RBP14.47□□□□□ -0.09
TIMP3-201ENST00000266085 PRKCDQ05655 676 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 DLX2Q07687 328 aaPredicted RBP14.47□□□□□ -0.09
TIMP3-201ENST00000266085 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 DDIT4LQ96D03 193 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 METTL8Q9H825 291 aaKnown RBP14.47□□□□□ -0.09
TIMP3-201ENST00000266085 ABCG2Q9UNQ0 655 aa14.47□□□□□ -0.09
TIMP3-201ENST00000266085 FARSAQ9Y285 508 aaKnown RBP14.47□□□□□ -0.09
TIMP3-201ENST00000266085 ERCC1P07992 297 aaPredicted RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 GSTT2P0CG29 244 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 CD27P26842 260 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 ADH7P40394 386 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 BMXP51813 675 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 CTBP2P56545 445 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 WNT4P56705 351 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 MRPL49Q13405 166 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 TMEM69Q5SWH9 247 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 Q8N402 240 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 INO80EQ8NBZ0 244 aaPredicted RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 SLC37A2Q8TED4 501 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 FCAMRQ8WWV6 532 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 BPIFA2Q96DR5 249 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 DHRS1Q96LJ7 313 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 MAP3K3Q99759 626 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 MKRN2Q9H000 416 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 CIB4A0PJX0 185 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 CDC14CA4D256 554 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 FAM227AF5H4B4 570 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 MRPS14O60783 128 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 YES1P07947 543 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 HOXC8P31273 242 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 AP2S1P53680 142 aaPredicted RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 SELENOVP59797 346 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 CSNK1G2P78368 415 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 SLC18B1Q6NT16 456 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 ULK3Q6PHR2 472 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 LILRA6Q6PI73 481 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 FIP1L1Q6UN15 594 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 MEX3DQ86XN8 651 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PLCZ1Q86YW0 608 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 AGBL5Q8NDL9 886 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 GATA6Q92908 595 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 NOP16Q9Y3C1 178 aaKnown RBP14.46□□□□□ -0.09
TIMP3-201ENST00000266085 HS3ST3A1Q9Y663 406 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 LOXHD1Q8IVV2 1947 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 GNAO1P09471 354 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 SFTPDP35247 375 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 UGT8Q16880 541 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PRAMEF8Q5VWM4 474 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PRAMEF7Q5VXH5 474 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PLAG1Q6DJT9 500 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 LIMS2Q7Z4I7 341 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 TMEM151AQ8N4L1 468 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PMM1Q92871 262 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 BTBD2Q9BX70 525 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 FGF21Q9NSA1 209 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 PISDQ9UG56 409 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 USP22Q9UPT9 525 aa14.46□□□□□ -0.09
TIMP3-201ENST00000266085 TEX13DA0A0J9YY54 714 aaPredicted RBP14.46□□□□□ -0.1
TIMP3-201ENST00000266085 FOXD2O60548 495 aaPredicted RBP14.46□□□□□ -0.1
TIMP3-201ENST00000266085 RGS9O75916 674 aaPredicted RBP14.46□□□□□ -0.1
TIMP3-201ENST00000266085 FURINP09958 794 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 KCNJ10P78508 379 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 TLDC1Q6P9B6 456 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 TMPPEQ6ZT21 453 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 GPR137CQ8N3F9 429 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 OR14L1PQ8NHC6 308 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 C2orf42Q9NWW7 574 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 SH2B3Q9UQQ2 575 aa14.46□□□□□ -0.1
TIMP3-201ENST00000266085 TNFRSF10CO14798 259 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 LRRTM2O43300 516 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 STOMP27105 288 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 MAGEA8P43361 318 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 FUNDC1Q8IVP5 155 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 URM1Q9BTM9 101 aaKnown RBP14.45□□□□□ -0.1
TIMP3-201ENST00000266085 TUBB1Q9H4B7 451 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 VNN3Q9NY84 501 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 GMPR2Q9P2T1 348 aaKnown RBP14.45□□□□□ -0.1
TIMP3-201ENST00000266085 DCNP07585 359 aaKnown RBP14.45□□□□□ -0.1
TIMP3-201ENST00000266085 REEP5Q00765 189 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 E2F1Q01094 437 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 TRIM61Q5EBN2 209 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 C18orf63Q68DL7 685 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 FAM111BQ6SJ93 734 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 GDPGP1Q6ZNW5 385 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF595Q8IYB9 648 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF100Q8IYN0 542 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 ZSCAN1Q8NBB4 408 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 SGCDQ92629 289 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 BEX2Q9BXY8 128 aa14.45□□□□□ -0.1
TIMP3-201ENST00000266085 BEX1Q9HBH7 125 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms