RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 A6NCN8 305 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 SLC1A7O00341 560 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 FCMRO60667 390 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 SNX4O95219 450 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 ALPLP05186 524 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 CKMT1AP12532 417 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 MAP2K4P45985 399 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 WNT3P56703 355 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 ITGADQ13349 1161 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 PUM1Q14671 1186 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 YOD1Q5VVQ6 348 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 TRIQKQ629K1 86 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 DNM1P34Q6PK57 102 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 RBM45Q8IUH3 476 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 OR4K13Q8NH42 304 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 THEM6Q8WUY1 208 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 C2orf42Q9NWW7 574 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 KLF15Q9UIH9 416 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 SERTM1A2A2V5 107 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 MT-ND2P03891 347 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 FUT1P19526 365 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 SLC6A8P48029 635 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 ARFIP1P53367 373 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 TSTQ16762 297 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 PLK5Q496M5 336 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 HMBOX1Q6NT76 420 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 ARL9Q6T311 187 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 PTOV1Q86YD1 416 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 OR2AJ1Q8NGZ0 328 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 TSEN15Q8WW01 171 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 AMBRA1Q9C0C7 1298 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 DUSP22Q9NRW4 184 aa13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 TUBA8Q9NY65 449 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-201ENST00000265810 DSCR3O14972 297 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 BPIFA2Q96DR5 249 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 SDF2Q99470 211 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 SEC14L5O43304 696 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 ARHGEF9O43307 516 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 FOLR1P15328 257 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 GBX2P52951 348 aaPredicted RBP13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 ANGPT1Q15389 498 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 SPATC1Q76KD6 591 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 CCDC103Q8IW40 242 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 MND1Q9BWT6 205 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 PCDHGA8Q9Y5G5 932 aa13.46□□□□□ -0.26
PDLIM2-201ENST00000265810 ARID1BQ8NFD5 2236 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ZNF264O43296 627 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ASNA1O43681 348 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 AKAP8O43823 692 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ZNF26P17031 533 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 HLCSP50747 726 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 DCTN2Q13561 401 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 PDSS1Q5T2R2 415 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 TBPL2Q6SJ96 375 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 Q6ZPB1 254 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 LHFPL3Q86UP9 236 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 DUSP19Q8WTR2 217 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 UCN3Q969E3 161 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 HSPE1-MOB4S4R3N1 261 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CACNA1EQ15878 2313 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 SERINC4A6NH21 518 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 PNMTP11086 282 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 TRHRP34981 398 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 SFTPDP35247 375 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 UBE2IP63279 158 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 GK3PQ14409 553 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 MSRB3Q8IXL7 192 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 AP3S1Q92572 193 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 SECISBP2Q96T21 854 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 OLAHQ9NV23 265 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 GALNT8Q9NY28 637 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 GPR83Q9NYM4 423 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 FMO6PO60774 539 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 INMTO95050 263 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 EIF1AXP47813 144 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 PCYT1AP49585 367 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CTXN1P60606 82 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CDK5R2Q13319 367 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 PDE7AQ13946 482 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CAMKMTQ7Z624 323 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CYB561A3Q8NBI2 242 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 OR7G1Q8NGA0 311 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 C8orf44Q96CB5 159 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 CDC6Q99741 560 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 ELL3Q9HB65 397 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 TAS2R10Q9NYW0 307 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 B4GALT7Q9UBV7 327 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 TSC22D4Q9Y3Q8 395 aa13.45□□□□□ -0.26
PDLIM2-201ENST00000265810 FLRT2O43155 660 aa13.44□□□□□ -0.26
PDLIM2-201ENST00000265810 GASTP01350 101 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms