RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 FLRT3Q9NZU0 649 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 PRPF19Q9UMS4 504 aaKnown RBP13.06□□□□□ -0.32
SSBP1-201ENST00000265304 LHX6Q9UPM6 363 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 L3MBTL1Q9Y468 752 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 DTNAQ9Y4J8 743 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 GPC6Q9Y625 555 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-201ENST00000265304 TMEM247A6NEH6 219 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 PRAMEF25A6NGN4 478 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 KLRC4-KLRK1H3BQV0 150 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 EBAG9O00559 213 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 GLSO94925 669 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 P04436 131 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 BCHEP06276 602 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 DCTP40126 519 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 RASSF2P50749 326 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 SCARB2Q14108 478 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 ELOAQ14241 798 aaKnown RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 MAPK14Q16539 360 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 CYP51A1Q16850 503 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 FLYWCH1Q4VC44 716 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 YTHDF3Q7Z739 585 aaKnown RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 GRAMD2AQ8IUY3 354 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 SULF2Q8IWU5 870 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 DEFB107AQ8IZN7 70 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF527Q8NB42 609 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 OR2T12Q8NG77 320 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 OR52E4Q8NGH9 312 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 C5orf34Q96MH7 638 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 CDRT15Q96T59 188 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 BTBD10Q9BSF8 475 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 RTN4RQ9BZR6 473 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 ALG2Q9H553 416 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
SSBP1-201ENST00000265304 MRPS18CQ9Y3D5 142 aaKnown RBP13.05□□□□□ -0.32
SSBP1-201ENST00000265304 ELOVL7A1L3X0 281 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 B4DXG7 233 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 SLC28A2O43868 658 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 PEX1O43933 1283 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 MFN2O95140 757 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 F10P00742 488 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 DBIP07108 87 aaKnown RBP13.04□□□□□ -0.32
SSBP1-201ENST00000265304 MSX1P28360 303 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 CRYBA2P53672 197 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 PLAURQ03405 335 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 C17orf67Q0P5P2 114 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 KLRB1Q12918 225 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 CEACAM7Q14002 265 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 INTS11Q5TA45 600 aaKnown RBP13.04□□□□□ -0.32
SSBP1-201ENST00000265304 RNF220Q5VTB9 566 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 PATL1Q86TB9 770 aaKnown RBP13.04□□□□□ -0.32
SSBP1-201ENST00000265304 MICU2Q8IYU8 434 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 FADS6Q8N9I5 356 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 WDSUB1Q8N9V3 476 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 TOR1AIP2Q8NFQ8 470 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 NFKBIDQ8NI38 313 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 HES7Q9BYE0 225 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 SDHAF3Q9NRP4 125 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 IFT52Q9Y366 437 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 WIF1Q9Y5W5 379 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 MPDZO75970 2070 aa13.04□□□□□ -0.32
SSBP1-201ENST00000265304 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
SSBP1-201ENST00000265304 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 TMEM229AB2RXF0 380 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 ETV2O00321 342 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 SNPHO15079 494 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 EIF4E2O60573 245 aaKnown RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 NID1P14543 1247 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 ELAVL4P26378 380 aaKnown RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 CLK3P49761 638 aaKnown RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 ST13P50502 369 aaKnown RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 DLX5P56178 289 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 LY6DQ14210 128 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 GPR68Q15743 365 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 NADK2Q4G0N4 442 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 DNAL1Q4LDG9 190 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 BICRALQ6AI39 1079 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF324BQ6AW86 544 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 DHRS4L2Q6PKH6 230 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 OLIG3Q7RTU3 272 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 PEX5LQ8IYB4 626 aa13.03□□□□□ -0.32
SSBP1-201ENST00000265304 BHLHE22Q8NFJ8 381 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-201ENST00000265304 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms