RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MVDP53602 400 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 RPP38P78345 283 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 HPCAP84074 193 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 SRSF1Q07955 248 aaKnown RBP eCLIP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 KLF10Q13118 480 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 SELPLGQ14242 412 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 MAPK14Q16539 360 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 CBLN3Q6UW01 205 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 TRILQ7L0X0 811 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 MTDHQ86UE4 582 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 GHDCQ8N2G8 530 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 OR14L1PQ8NHC6 308 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 GOT1L1Q8NHS2 421 aaPredicted RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 PHOSPHO1Q8TCT1 267 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 ROPN1LQ96C74 230 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 UBQLN3Q9H347 655 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 KCNE5Q9UJ90 142 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 ERRFI1Q9UJM3 462 aaPredicted RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 DKKL1Q9UK85 242 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 MRTO4Q9UKD2 239 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 WDR45Q9Y484 360 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 CAPN7Q9Y6W3 813 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 NAV2Q8IVL1 2488 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 AKAP6Q13023 2319 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 MED12LQ86YW9 2145 aa6.6□□□□□ -1.35
DEPDC1B-201ENST00000265036 A0A1W2PP18 115 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 GMNCA6NCL1 334 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 KDM4EB2RXH2 506 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 CLIC1O00299 241 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 FBP2O00757 339 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SCDO00767 359 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 LRRTM2O43300 516 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 HCRTR2O43614 444 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 AGFG2O95081 481 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SNX4O95219 450 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 NUDT14O95848 222 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 OPN1LWP04000 364 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 IFI6P09912 130 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 UBTFL6P0CB48 400 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 AQP1P29972 269 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 GAS1P54826 345 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 KCNC4Q03721 635 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 CHRNEQ04844 493 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 NFYCQ13952 458 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TBCELQ5QJ74 424 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ATAD3BQ5T9A4 648 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC30A6Q6NXT4 461 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZCCHC12Q6PEW1 402 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ARSKQ6UWY0 536 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 FRRS1Q6ZNA5 592 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 PLCZ1Q86YW0 608 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 UBQLNLQ8IYU4 475 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SMPDL3BQ92485 455 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TMEM41AQ96HV5 264 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SECISBP2Q96T21 854 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 G6PC3Q9BUM1 346 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 NSRP1Q9H0G5 558 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TMEM185BQ9H7F4 350 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 PNPLA3Q9NST1 481 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 EXD2Q9NVH0 621 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 CARD8Q9Y2G2 431 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 NDUFAF1Q9Y375 327 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 POLQO75417 2590 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 A0A096LPI6 279 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TRGV5A0A0B4J1U4 118 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 A1L4Q6 167 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SNX3O60493 162 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SNRPB2P08579 225 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 KRT16P08779 473 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 NR2F1P10589 423 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 HOXB9P17482 250 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ELAVL4P26378 380 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 DPP4P27487 766 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 PTGS2P35354 604 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 STARP49675 285 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 DSTNP60981 165 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF117Q03924 483 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SRYQ05066 204 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC10A1Q14973 349 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 MMEL1Q495T6 779 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 RAET1LQ5VY80 246 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 REP15Q6BDI9 236 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TYW3Q6IPR3 259 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF585AQ6P3V2 769 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ARHGAP11AQ6P4F7 1023 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 DNAJA3Q96EY1 480 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TMEM19Q96HH6 336 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF350Q9GZX5 532 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 UBQLN4Q9NRR5 601 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 TAS2R10Q9NYW0 307 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 LEF1Q9UJU2 399 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ACAD8Q9UKU7 415 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 PHF3Q92576 2039 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 ITPR2Q14571 2701 aa6.59□□□□□ -1.35
DEPDC1B-201ENST00000265036 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms