RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 K7ERQ8 282 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 FOXE1O00358 373 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 SGCEO43556 437 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 GALR3O60755 368 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 GATBO75879 557 aaKnown RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 SLCO2B1O94956 709 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 TIMP1P01033 207 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 RLN2P04090 185 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 IFNA4P05014 189 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 OPRD1P41143 372 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 RAP2BP61225 183 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 SEC61A1P61619 476 aaKnown RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 ZNF528Q3MIS6 628 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MINDY4Q4G0A6 757 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 METTL11BQ5VVY1 283 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 OR5M10Q6IEU7 315 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 VRK3Q8IV63 474 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 FBXO15Q8NCQ5 510 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 OR4K1Q8NGD4 311 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 TRMT10AQ8TBZ6 339 aaKnown RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 TIFAQ96CG3 184 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 FAM83CQ9BQN1 747 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 BCL2L14Q9BZR8 327 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 ABCG4Q9H172 646 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 SLC6A20Q9NP91 592 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 CA10Q9NS85 328 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 TEX10Q9NXF1 929 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 A0A1B0GW55 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 ARPC5O15511 151 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 RGS9O75916 674 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L2P0CJ85 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L3P0CJ86 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L4P0CJ87 422 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L5P0CJ88 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L6P0CJ89 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4L7P0CJ90 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MMP15P51511 669 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 EFNB1P98172 346 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 ZNF155Q12901 538 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 SMAD2Q15796 467 aaKnown RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 EOGTQ5NDL2 527 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MED27Q6P2C8 311 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 TAS1R1Q7RTX1 841 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 SPICQ8N5J4 248 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 PPCDCQ96CD2 204 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 ZNF689Q96CS4 500 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 TINAGL1Q9GZM7 467 aaPredicted RBP12.28□□□□□ -0.44
NUP54-201ENST00000264883 ARL6Q9H0F7 186 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MYNNQ9NPC7 610 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 EQTNQ9NQ60 294 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 MED11Q9P086 117 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 DUX4Q9UBX2 424 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 SEC14L3Q9UDX4 400 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 BACE2Q9Y5Z0 518 aa12.28□□□□□ -0.44
NUP54-201ENST00000264883 A0A0G2JPF8 293 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 TRABD2BA6NFA1 517 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 HNRNPCL3B7ZW38 293 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 C6orf47O95873 294 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 HNRNPCL4P0DMR1 293 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 RORAP35398 523 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 VEGFCP49767 419 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 PSMA6P60900 246 aaKnown RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 SIM1P81133 766 aaPredicted RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 PITPNAQ00169 270 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 PTSQ03393 145 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 LGALS3BPQ08380 585 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 UBXN2BQ14CS0 331 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 ZNF791Q3KP31 576 aaPredicted RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 VASNQ6EMK4 673 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 SFRP4Q6FHJ7 346 aaPredicted RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 AGTRAPQ6RW13 159 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 IKBIPQ70UQ0 350 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 KLHL36Q8N4N3 616 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 PXT1Q8NFP0 134 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 BPIFCQ8NFQ6 507 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 OR56A3Q8NH54 315 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 TEX47Q8TBZ9 253 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 SFT2D1Q8WV19 159 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.44
NUP54-201ENST00000264883 FAIM2Q9BWQ8 316 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 LINC00597Q9H2U6 94 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 NTMQ9P121 344 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 FBXW2Q9UKT8 454 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.44
NUP54-201ENST00000264883 CARNS1A5YM72 827 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 LRRN3E7EW58 273 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 NME6O75414 186 aaPredicted RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 EIF3GO75821 320 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms