RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SLC35A3Q9Y2D2 325 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 A8MVJ9 347 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 MAS1P04201 325 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 UCHL1P09936 223 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 FURINP09958 794 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 PPP5CP53041 499 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 PFN3P60673 137 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TLE3Q04726 772 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TMEM53Q6P2H8 277 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 XKRXQ6PP77 449 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 CCBE1Q6UXH8 406 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF565Q8N9K5 539 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF431Q8TF32 576 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 CREB3L1Q96BA8 519 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TBC1D20Q96BZ9 403 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF304Q9HCX3 659 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 HPF1Q9NWY4 346 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 A8MV72 311 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 L7N2F9 121 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 ALPLP05186 524 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 FXYD6P3P58550 94 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 VAMP2P63027 116 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TBRG1Q3YBR2 411 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 GDPGP1Q6ZNW5 385 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 SGCDQ92629 289 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 BTBD2Q9BX70 525 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 C2orf42Q9NWW7 574 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 FUOMA2VDF0 154 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 H3BML4 177 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 J3KTA2 159 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 CXCL10P02778 98 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 CDK4P11802 303 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF43P17038 809 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 CEBPGP53567 150 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 FIP1L1Q6UN15 594 aaKnown RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 BAIAP2L2Q6UXY1 529 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TMEFF1Q8IYR6 380 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 SLC15A4Q8N697 577 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ELP5Q8TE02 316 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 TM7SF3Q9NS93 570 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 C7orf72A4D263 438 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 NPPBP16860 134 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 CXCR4P61073 352 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 REEP5Q00765 189 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 ENTPD8Q5MY95 495 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ULK3Q6PHR2 472 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF576Q9H609 170 aa13.14□□□□□ -0.31
CDH3-201ENST00000264012 ZNF443Q9Y2A4 671 aaPredicted RBP13.14□□□□□ -0.31
CDH3-201ENST00000264012 CHRNEQ04844 493 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ERV3-1Q14264 604 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 UEVLDQ8IX04 471 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SLC38A5Q8WUX1 472 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 URM1Q9BTM9 101 aaKnown RBP13.13□□□□□ -0.31
CDH3-201ENST00000264012 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 TMEM185BQ9H7F4 350 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 VDAC3Q9Y277 283 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 OR2T1O43869 369 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CRHBPP24387 322 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SOX3P41225 446 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 S100A10P60903 97 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 HERV-K104P61576 105 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CDKN3Q16667 212 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 PRAMEF8Q5VWM4 474 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 PRAMEF7Q5VXH5 474 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 GPR137CQ8N3F9 429 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SDR9C7Q8NEX9 313 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 OR5T2Q8NGG2 359 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 NDNFQ8TB73 568 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ENPP5Q9UJA9 477 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CBLCQ9ULV8 474 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SLC7A11Q9UPY5 501 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 SCGB1D2O95969 90 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 CTHP32929 405 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 AKR1D1P51857 326 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 RELAQ04206 551 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 TP53I3Q53FA7 332 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 RHBDD1Q8TEB9 315 aa13.13□□□□□ -0.31
CDH3-201ENST00000264012 ZFP90Q8TF47 636 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms