RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ALAS2P22557 587 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR10A3P58181 314 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 BNC1Q01954 994 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 DEFB134Q4QY38 66 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 METRNLQ641Q3 311 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR4N4Q8N0Y3 316 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 FBXL6Q8N531 539 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 LINC00471Q8N535 108 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR56A1Q8NGH5 318 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR10G6Q8NH81 332 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 PIGKQ92643 395 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 UPRTQ96BW1 309 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 SLC38A1Q9H2H9 487 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 MRPL15Q9P015 296 aaKnown RBP11.82□□□□□ -0.52
LIG1-201ENST00000263274 RASD1Q9Y272 281 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 A0A1W2PRG6 482 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 LRRC72A6NJI9 287 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 C4orf51C9J302 202 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 TSPAN4O14817 238 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 CISD3P0C7P0 127 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 NDUFV2P19404 249 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 ATP5A1P25705 553 aaKnown RBP11.82□□□□□ -0.52
LIG1-201ENST00000263274 ERP29P30040 261 aaKnown RBP11.82□□□□□ -0.52
LIG1-201ENST00000263274 EVX1P49640 407 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 RAB28P51157 221 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 MAB21L1Q13394 359 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 FIGNL1Q6PIW4 674 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 VITQ6UXI7 678 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 CEACAM19Q7Z692 300 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 ACBD7Q8N6N7 88 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR6C4Q8NGE1 309 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR2A1Q8NGT9 310 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 OR14C36Q8NHC7 312 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 WFIKKN2Q8TEU8 576 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 RSPRY1Q96DX4 576 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 ATF6BQ99941 703 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 ZC4H2Q9NQZ6 224 aa11.82□□□□□ -0.52
LIG1-201ENST00000263274 B8ZZF3 427 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 CD3GP09693 182 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 PRKACAP17612 351 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 EVI2BP34910 448 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SEC13P55735 322 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 AGERQ15109 404 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 PGGHGQ32M88 737 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ZNF628Q5EBL2 1059 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ZC3H14Q6PJT7 736 aaKnown RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 SIRT6Q8N6T7 355 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 LRRC17Q8N6Y2 441 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 OR52E1Q8NGJ3 308 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SENP5Q96HI0 755 aaPredicted RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 ALG8Q9BVK2 526 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 POLHQ9Y253 713 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 TRDV1A0A1B0GX56 115 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 A0A1W2PPV9 198 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 CDC42EP2O14613 210 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 CLEC3AO75596 197 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 LAMP2P13473 410 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 DDX6P26196 483 aaKnown RBP eCLIP11.81□□□□□ -0.527e-10■■■■■ 60
LIG1-201ENST00000263274 GDF7Q7Z4P5 450 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 IZUMO1Q8IYV9 350 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 LRRC20Q8TCA0 184 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ACOT11Q8WXI4 607 aaPredicted RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 MS4A6EQ96DS6 147 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SLA2Q9H6Q3 261 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 NUDT15Q9NV35 164 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 USP36Q9P275 1121 aaKnown RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 DPP7Q9UHL4 492 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ACAD8Q9UKU7 415 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SF3B6Q9Y3B4 125 aaKnown RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 SPEGQ15772 3267 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 A0A0B4J203 849 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 H3BSH0 61 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 HCN1O60741 890 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 TOXO94900 526 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SYPP08247 313 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 PYCR1P32322 319 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 FBXO46Q6PJ61 603 aaPredicted RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 RASSF6Q6ZTQ3 369 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ADGRD2Q7Z7M1 963 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 VWCEQ96DN2 955 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SLC35A4Q96G79 324 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 SPOCK3Q9BQ16 436 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 OR52D1Q9H346 318 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 FGF20Q9NP95 211 aaPredicted RBP11.81□□□□□ -0.52
LIG1-201ENST00000263274 NCKAP1Q9Y2A7 1128 aa11.81□□□□□ -0.52
LIG1-201ENST00000263274 TCF20Q9UGU0 1960 aaKnown RBP11.8□□□□□ -0.52
LIG1-201ENST00000263274 A0A0A6YYD5 115 aa11.8□□□□□ -0.52
LIG1-201ENST00000263274 IGKV1-8A0A0C4DH67 115 aa11.8□□□□□ -0.52
LIG1-201ENST00000263274 H3BUI4 141 aa11.8□□□□□ -0.52
LIG1-201ENST00000263274 GTPBP1O00178 669 aaKnown RBP11.8□□□□□ -0.52
LIG1-201ENST00000263274 BTN3A3O00478 584 aa11.8□□□□□ -0.52
LIG1-201ENST00000263274 STK25O00506 426 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms