RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
MSH4-201ENST00000263187 LOC105369274A0A096LPK9 316 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 SNTNA6NMZ2 147 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 PRKNO60260 465 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 EIF4EP06730 217 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 CD3GP09693 182 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 LINC00271P0C7V0 271 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 SAGP10523 405 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 MPIP34949 423 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PRR5P85299 388 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 EFNB1P98172 346 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ST3GAL3Q11203 375 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 FGL2Q14314 439 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 MAPK14Q16539 360 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 GXYLT1Q4G148 440 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR4N4Q8N0Y3 316 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RFLNBQ8N5W9 214 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 FRMD1Q8N878 549 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR4M1Q8NGD0 313 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR10G6Q8NH81 332 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 CCL4L1Q8NHW4 92 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PIGKQ92643 395 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 DIO2Q92813 273 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RBFOX1Q9NWB1 397 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 CBLCQ9ULV8 474 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 LIPT1Q9Y234 373 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ZNF780BQ9Y6R6 833 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 COL4A3Q01955 1670 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 TMEM129A0AVI4 362 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 DAPL1A0PJW8 107 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 LRRC72A6NJI9 287 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR2B3O76000 313 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 TOXO94900 526 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 HLA-DPB1P04440 258 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RPN2P04844 631 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 FCER2P06734 321 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ZNF888P0CJ79 500 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 ARSBP15848 533 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 FRKP42685 505 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 MAGEB1P43366 347 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RAB28P51157 221 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PPP3R1P63098 170 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PGGHGQ32M88 737 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 SLC25A35Q3KQZ1 300 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ZNF322Q6U7Q0 402 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 WDR88Q6ZMY6 472 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 MTSS1LQ765P7 747 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 GPR135Q8IZ08 494 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 C17orf47Q8NEP4 570 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR14C36Q8NHC7 312 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 HMGB4Q8WW32 186 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 FGF11Q92914 225 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ORAI3Q9BRQ5 295 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ALG8Q9BVK2 526 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 IFT27Q9BW83 186 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RBCK1Q9BYM8 510 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ABCG5Q9H222 651 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 UBQLN3Q9H347 655 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 STARD5Q9NSY2 213 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 EXOSC1Q9Y3B2 195 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 WDR45Q9Y484 360 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 A0A0G2JPF8 293 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 HNRNPCL2B2RXH8 293 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 HNRNPCL3B7ZW38 293 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 H0Y8X5 98 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 SLC9A3R1O14745 358 aaPredicted RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 SCO2O43819 266 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 HNRNPCL4P0DMR1 293 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 MAKP20794 623 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 GSTM3P21266 225 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 DRD3P35462 400 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 RPS5P46782 204 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 ABATP80404 500 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 DPTQ07507 201 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 MRPL28Q13084 256 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 DSG2Q14126 1118 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
MSH4-201ENST00000263187 C2orf27AQ580R0 203 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 YIF1BQ5BJH7 314 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 AADACL4Q5VUY2 407 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 CDC73Q6P1J9 531 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 VITQ6UXI7 678 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 THSD4Q6ZMP0 1018 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PRSS45Q7RTY3 260 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 CEACAM19Q7Z692 300 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 OR2T33Q8NG76 320 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ZNF559Q9BR84 538 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 TMEM43Q9BTV4 400 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 PINK1Q9BXM7 581 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 ENAMQ9NRM1 1142 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 NUDT15Q9NV35 164 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 KLHL28Q9NXS3 571 aa8.51□□□□□ -1.05
MSH4-201ENST00000263187 EMC8O43402 210 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ZGLP1P0C6A0 271 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 F3P13726 295 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 PEBP1P30086 187 aaKnown RBP8.5□□□□□ -1.05
MSH4-201ENST00000263187 SSTR2P30874 369 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms