RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 FOLR3P41439 243 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 NR0B1P51843 470 aaKnown RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 SLC26A5P58743 744 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 RNF4P78317 190 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ADARB1P78563 741 aaKnown RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 FGFBP1Q14512 234 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ZIK1Q3SY52 487 aaPredicted RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 DCST1Q5T197 706 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 SLC34A3Q8N130 599 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 CACTIN-AS1Q8N1I8 211 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF527Q8NB42 609 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 DIO2Q92813 273 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 SLC35B4Q969S0 331 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 EFHD2Q96C19 240 aaPredicted RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 LMF1Q96S06 567 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 MCHR1Q99705 422 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 MESP1Q9BRJ9 268 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF223Q9UK11 482 aaPredicted RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 TRBV4-1A0A0J9YWV2 114 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 PRKNO60260 465 aaPredicted RBP12□□□□□ -0.49
VAMP7-201ENST00000262640 TPST2O60704 377 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 FMO6PO60774 539 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 KRT20P35900 424 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF136P52737 540 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 C3orf38Q5JPI3 329 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 TTC23Q5W5X9 447 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 PLEKHM3Q6ZWE6 761 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 SLC5A8Q8N695 610 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 OR8K3Q8NH51 312 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 NUBPLQ8TB37 319 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 C8orf44Q96CB5 159 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 MBOAT4Q96T53 435 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 FEVQ99581 238 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 FUZQ9BT04 418 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 B3GNT4Q9C0J1 378 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 ANKRD19PQ9H560 264 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 UBQLN4Q9NRR5 601 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 KRT84Q9NSB2 600 aa12□□□□□ -0.49
VAMP7-201ENST00000262640 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 CPSF4LA6NMK7 179 aaKnown RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 OR5F1O95221 314 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 CSRP1P21291 193 aaKnown RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 MYF6P23409 242 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 IL12BP29460 328 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 PLCXD2Q0VAA5 305 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ST3GAL3Q11203 375 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ENTPD8Q5MY95 495 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 TIPARPQ7Z3E1 657 aaKnown RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 TSPYL5Q86VY4 417 aaPredicted RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 LINC00471Q8N535 108 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF555Q8NEP9 628 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 NRSN2Q9GZP1 204 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF700Q9H0M5 742 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF556Q9HAH1 456 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 TESQ9UGI8 421 aaKnown RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 KIF26BQ2KJY2 2108 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 TRBV11-1A0A0K0K1C0 115 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 SPAARA0A1B0GVQ0 90 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 SERINC4A6NH21 518 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 MITFO75030 526 aaPredicted RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 REM1O75628 298 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 UTS2O95399 124 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ITGAMP11215 1152 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 FUT4P22083 530 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 NRG3P56975 720 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 HOXC5Q00444 222 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 KCNAB2Q13303 367 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 TRAM2Q15035 370 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 PCOLCEQ15113 449 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 ESX1Q8N693 406 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 OR5L2Q8NGL0 311 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 OR4C3Q8NH37 302 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 CT55Q8WUE5 264 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
VAMP7-201ENST00000262640 MAN2C1Q9NTJ4 1040 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 FOXJ2Q9P0K8 574 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 SLC35A3Q9Y2D2 325 aa11.99□□□□□ -0.49
VAMP7-201ENST00000262640 SH3PXD2BA1X283 911 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 CDC14CA4D256 554 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 TSPAN2O60636 221 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 CYP7B1O75881 506 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 HPGDP15428 266 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 CBLP22681 906 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 RNF144AP50876 292 aaPredicted RBP11.98□□□□□ -0.49
VAMP7-201ENST00000262640 IL1RL1Q01638 556 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 KLHL26Q53HC5 615 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 FAM69BQ5VUD6 431 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF770Q6IQ21 691 aaPredicted RBP11.98□□□□□ -0.49
VAMP7-201ENST00000262640 KRT80Q6KB66 452 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 USP51Q70EK9 711 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 GALNT5Q7Z7M9 940 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 TOR1AIP2Q8NFQ8 470 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 OR9Q2Q8NGE9 314 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 SLC7A13Q8TCU3 470 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 ADAMTS16Q8TE57 1224 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 OMA1Q96E52 524 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 ZNF559Q9BR84 538 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 PRR14Q9BWN1 585 aa11.98□□□□□ -0.49
VAMP7-201ENST00000262640 CTPS2Q9NRF8 586 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms