RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 GPR4P46093 362 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 FASLGP48023 281 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 DOC2BQ14184 412 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 HEPHL1Q6MZM0 1159 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ZNF730Q6ZMV8 503 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ARHGEF39Q8N4T4 335 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 TMEM255BQ8WV15 326 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 MED30Q96HR3 178 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 COQ7Q99807 217 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 CNPPD1Q9BV87 410 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 PTGFRNQ9P2B2 879 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 WNT16Q9UBV4 365 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 MGAT4BQ9UQ53 548 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
VMP1-201ENST00000262291 DSPPQ9NZW4 1301 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 TMEM265A0A087WTH1 108 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 HYKKA2RU49 373 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 CLCA1A8K7I4 914 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 CBX7O95931 251 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 PDGFBP01127 241 aaPredicted RBP12.62□□□□□ -0.39
VMP1-201ENST00000262291 ATP1B1P05026 303 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 FUT1P19526 365 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ALAS2P22557 587 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 STX4Q12846 297 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 PRTGQ2VWP7 1150 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ACSM5Q6NUN0 579 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 KIF18BQ86Y91 864 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ELMOD2Q8IZ81 293 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 C1orf216Q8TAB5 229 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 VMP1Q96GC9 406 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 ARHGDIGQ99819 225 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 NDOR1Q9UHB4 597 aa12.62□□□□□ -0.39
VMP1-201ENST00000262291 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 DUXAA6NLW8 204 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 ALX3O95076 343 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CH25HO95992 272 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PTHP01270 115 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 NUDT1P36639 197 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 OR1D4P47884 311 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 P2RX3P56373 397 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 FOXL2P58012 376 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 GALK2Q01415 458 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 ZNF267Q14586 743 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PRR23CQ6ZRP0 262 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PRSS58Q8IYP2 241 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 VWA5B2Q8N398 1253 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 AHCYL2Q96HN2 611 aaKnown RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 SHDQ96IW2 340 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CPNE5Q9HCH3 593 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 GPR52Q9Y2T5 361 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 A8MUA0 341 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 LMO7DNF2Z398 122 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 MEN1O00255 615 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PRKYO43930 277 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 TMCC2O75069 709 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PIAS2O75928 621 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 LIPAP38571 399 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CXCL12P48061 93 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 HNRNPKP61978 463 aaKnown RBP eCLIP12.61□□□□□ -0.391e-38■■□□□ 14.3
VMP1-201ENST00000262291 GINS1Q14691 196 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 DGUOKQ16854 277 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 SOWAHCQ53LP3 525 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 SAMD14Q8IZD0 417 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 CADM4Q8NFZ8 388 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 NELL2Q99435 816 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 TTYH2Q9BSA4 534 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CHRDQ9H2X0 955 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 PIGUQ9H490 435 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 NTMQ9P121 344 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 DHCR7Q9UBM7 475 aaKnown RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 SLC7A7Q9UM01 511 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 EML5Q05BV3 1969 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 TMEM131Q92545 1883 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 AP3D1O14617 1153 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 CDK1P06493 297 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CKMT1AP12532 417 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 FNTBP49356 437 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 SMIM11AP58511 58 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 ATAD3CQ5T2N8 411 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 MRPL2Q5T653 305 aaKnown RBP12.61□□□□□ -0.39
VMP1-201ENST00000262291 GDF7Q7Z4P5 450 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 DIO2Q92813 273 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 TCTN2Q96GX1 697 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 DEPDC7Q96QD5 511 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
VMP1-201ENST00000262291 FBXO9Q9UK97 447 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms