RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SH3GL1Q99961 368 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 ZNF350Q9GZX5 532 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 UBQLN3Q9H347 655 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 GID8Q9NWU2 228 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 FLRT3Q9NZU0 649 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 MKLN1Q9UL63 735 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 OSGIN2Q9Y236 505 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 ARL2BPQ9Y2Y0 163 aa17.09■□□□□ 0.33
CYSTM1-201ENST00000261811 A0A1B0GVC2 190 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 C5orf58C9J3I9 102 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 AQP7O14520 342 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 BCKDKO14874 412 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 SLC19A2O60779 497 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 ETFAP13804 333 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 UQCRFS1P47985 274 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 CRISP3P54108 245 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 COX20Q5RI15 118 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 ZAR1Q86SH2 424 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 METTL25Q8N6Q8 603 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 NEIL3Q8TAT5 605 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 THUMPD3Q9BV44 507 aaKnown RBP17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 DSN1Q9H410 356 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 MTHFD2LQ9H903 347 aaPredicted RBP17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 VAPAQ9P0L0 249 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 GMEB1Q9Y692 573 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 ARHGAP21Q5T5U3 1957 aa17.08■□□□□ 0.32
CYSTM1-201ENST00000261811 POLEQ07864 2286 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 HEATR5AQ86XA9 2040 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 LOC100653049A0A140TA62 436 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 PYCARD-AS1I3L0S3 204 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 FCMRO60667 390 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 DCTN3O75935 186 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 KRT34O76011 436 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 H6PDO95479 791 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 DPP4P27487 766 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 ZNF141Q15928 474 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SYPL1Q16563 259 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 TRMT5Q32P41 509 aaKnown RBP17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 KLHL26Q53HC5 615 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 GKAP1Q5VSY0 366 aaPredicted RBP17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 AP1ARQ63HQ0 302 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 IFNEQ86WN2 208 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SNX32Q86XE0 403 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 OR2M3Q8NG83 312 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 CMTM5Q96DZ9 223 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 CGREF1Q99674 301 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SAP130Q9H0E3 1048 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 TAS2R10Q9NYW0 307 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SLC25A37Q9NYZ2 338 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 MED11Q9P086 117 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SLAMF8Q9P0V8 285 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 SUCOQ9UBS9 1254 aaKnown RBP17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 ADAM21Q9UKJ8 722 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 ACAD8Q9UKU7 415 aa17.07■□□□□ 0.32
CYSTM1-201ENST00000261811 PHF3Q92576 2039 aaKnown RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 IGLV3-32A0A0A0MS00 114 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 C15orf38-AP3S2A0A0A6YYH1 394 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 TRGV8A0A0C4DH27 118 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 MRASO14807 208 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 KIAA0513O60268 411 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 TPOP07202 933 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 STSP08842 583 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 CELA3AP09093 270 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 HOXB9P17482 250 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 ZNF41P51814 821 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 MVDP53602 400 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 PER3P56645 1201 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 HSF1Q00613 529 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 SF3B4Q15427 424 aaKnown RBP eCLIP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 RUNDC3AQ59EK9 446 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 PDZK1Q5T2W1 519 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 TYW3Q6IPR3 259 aaKnown RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 AAGABQ6PD74 315 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 MYO7BQ6PIF6 2116 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 APOOLQ6UXV4 268 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 DLEU7Q6UYE1 221 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 EIF3MQ7L2H7 374 aaKnown RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 PIGWQ7Z7B1 504 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 PEX5LQ8IYB4 626 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 FADS6Q8N9I5 356 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 GATSQ8NAP1 163 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 FAM83FQ8NEG4 500 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 B4GALNT2Q8NHY0 566 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 FAM57AQ8TBR7 257 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 ANKRD27Q96NW4 1050 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 CCT8L2Q96SF2 557 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 OR2B2Q9GZK3 357 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 ARMC7Q9H6L4 198 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 STOML1Q9UBI4 398 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 SLC35A3Q9Y2D2 325 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 ZNF835Q9Y2P0 537 aa17.06■□□□□ 0.32
CYSTM1-201ENST00000261811 A0A087WZY1 265 aa17.05■□□□□ 0.32
CYSTM1-201ENST00000261811 TRBV5-3A0A0A0MS03 114 aa17.05■□□□□ 0.32
CYSTM1-201ENST00000261811 NPIPA5A0A0B4J1W7 369 aa17.05■□□□□ 0.32
CYSTM1-201ENST00000261811 A0A0G2JPF8 293 aa17.05■□□□□ 0.32
CYSTM1-201ENST00000261811 SERINC4A6NH21 518 aa17.05■□□□□ 0.32
CYSTM1-201ENST00000261811 HNRNPCL2B2RXH8 293 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms