RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 LINC01387J3KSC0 135 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 EIF1AYO14602 144 aaKnown RBP17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 EMC8O43402 210 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 NDUFB5O43674 189 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 NPHS1O60500 1241 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 PEX11AO75192 247 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 AQP8O94778 261 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 FGF4P08620 206 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 ADAM8P78325 824 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 TMEM44Q2T9K0 475 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 DEFB113Q30KQ7 82 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 GLYR1Q49A26 553 aaPredicted RBP17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 CAMKMTQ7Z624 323 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 GGNQ86UU5 652 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 OR7A2PQ8NGA2 310 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 SH3YL1Q96HL8 342 aaPredicted RBP17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 KLHDC3Q9BQ90 382 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 RNF122Q9H9V4 155 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 ACSS1Q9NUB1 689 aaPredicted RBP17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 NTMQ9P121 344 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 AP4B1Q9Y6B7 739 aa17.1■□□□□ 0.33
TM6SF1-201ENST00000258909 ALG1L2C9J202 215 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 SLU7O95391 586 aaKnown RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 ALOX5P09917 674 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 ARRB2P32121 409 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 CD79BP40259 229 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 ASMTP46597 345 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 EIF1AXP47813 144 aaKnown RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 KCNJ5P48544 419 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 RNF144AP50876 292 aaPredicted RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 RPS3AP61247 264 aaKnown RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 VSNL1P62760 191 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 METTL25Q8N6Q8 603 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 COX18Q8N8Q8 333 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 FAM110BQ8TC76 370 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 TCP10LQ8TDR4 215 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 FAM120BQ96EK7 910 aaKnown RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 C3orf30Q96M34 536 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 C1orf50Q9BV19 199 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 SIRT3Q9NTG7 399 aaPredicted RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 EIF3LQ9Y262 564 aaKnown RBP17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 ZNF175Q9Y473 711 aa17.09■□□□□ 0.33
TM6SF1-201ENST00000258909 SIAH2O43255 324 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 CGAP01215 116 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 LAMP1P11279 417 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 POU2F1P14859 743 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 CREB1P16220 341 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 TBXA2RP21731 343 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 SLC6A8P48029 635 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 IFFO1Q0D2I5 559 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 PTGR1Q14914 329 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 ZNF550Q7Z398 422 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 R3HCC1LQ7Z5L2 792 aaKnown RBP17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 OR6Y1Q8NGX8 325 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 MTERF3Q96E29 417 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 EML4Q9HC35 981 aaKnown RBP17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 ZCCHC3Q9NUD5 404 aaKnown RBP17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 CLEC4AQ9UMR7 237 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 SNX8Q9Y5X2 465 aa17.08■□□□□ 0.32
TM6SF1-201ENST00000258909 A0A1W2PRB8 838 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 SCAMP2O15127 329 aaKnown RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 GOSR1O95249 250 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 HMGN2P05204 90 aaKnown RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 NUDT17P0C025 328 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 CCKARP32238 428 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 UGT2B10P36537 528 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 HPCAL1P37235 193 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 LASP1Q14847 261 aaKnown RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 RIBC1Q8N443 379 aaPredicted RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 WFDC11Q8NEX6 87 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 CDS1Q92903 461 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 ZC3HAV1LQ96H79 300 aaKnown RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 PPP3R2Q96LZ3 170 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 MED18Q9BUE0 208 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 PRRG4Q9BZD6 226 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 GSX1Q9H4S2 264 aaPredicted RBP17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 TMEM185BQ9H7F4 350 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 ATP6V1HQ9UI12 483 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 ZDHHC2Q9UIJ5 367 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 PROCRQ9UNN8 238 aa17.07■□□□□ 0.32
TM6SF1-201ENST00000258909 TMEM114B3SHH9 223 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 CTIFO43310 598 aaKnown RBP17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 NGFRP08138 427 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 HPGDP15428 266 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 CD53P19397 219 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 PRIM2P49643 509 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 POU6F2P78424 691 aaPredicted RBP17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 CD226Q15762 336 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 EXOC3L2Q2M3D2 409 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 XKR7Q5GH72 579 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 ANKRD34AQ69YU3 496 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 LRIG3Q6UXM1 1119 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 C22orf34Q6ZV56 151 aa17.06■□□□□ 0.32
TM6SF1-201ENST00000258909 KRTCAP2Q8N6L1 136 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms