RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 UBE2ZQ9H832 354 aaPredicted RBP23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 UCK1Q9HA47 277 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 DAPK2Q9UIK4 370 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 ZNF223Q9UK11 482 aaPredicted RBP23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 CFL2Q9Y281 166 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 CARD8Q9Y2G2 431 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 TGFBR3LH3BV60 316 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 FMO6PO60774 539 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 KCNK2O95069 426 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 CH25HO95992 272 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 RNH1P13489 461 aaKnown RBP23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 MTNR1AP48039 350 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 PLAURQ03405 335 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 OXA1LQ15070 435 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 GDPGP1Q6ZNW5 385 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 GKN2Q86XP6 184 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 TCTN2Q96GX1 697 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 LMF2Q9BU23 707 aaKnown RBP23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 TEX12Q9BXU0 123 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 APOL3O95236 402 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 MYL12AP19105 171 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 CD40LGP29965 261 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 CRYBB2P43320 205 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 SRSF5Q13243 272 aaKnown RBP23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 AADACL4Q5VUY2 407 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 TUBA3EQ6PEY2 450 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 CHRDQ9H2X0 955 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 EXOSC4Q9NPD3 245 aaKnown RBP23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 MED17Q9NVC6 651 aa23.36■■□□□ 1.33
TMEM55B-201ENST00000250489 LILRA5A6NI73 299 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 TAF4O00268 1085 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 PSMA1P25786 263 aaKnown RBP23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 SOX6P35712 828 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 PSG6Q00889 435 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 SLC13A2Q13183 592 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 FZD5Q13467 585 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 TRIM16LQ309B1 348 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 LSRQ86X29 649 aaPredicted RBP23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 PHC2Q8IXK0 858 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 PEX11GQ96HA9 241 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 SAMD8Q96LT4 415 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 FOLH1BQ9HBA9 442 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 CAPN10Q9HC96 672 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 STUB1Q9UNE7 303 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 DOLKQ9UPQ8 538 aa23.35■■□□□ 1.33
TMEM55B-201ENST00000250489 CCDC85CA6NKD9 419 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 WWP2O00308 870 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 RANBP1P43487 201 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 SKP1P63208 163 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 RNF113BQ8IZP6 322 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 OR2T33Q8NG76 320 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 SNRNP27Q8WVK2 155 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 TMEM239Q8WW34 195 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 SLC38A3Q99624 504 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 CNPPD1Q9BV87 410 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 TMEM129A0AVI4 362 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 UNC119BA6NIH7 251 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 SOX30O94993 753 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 MAOBP27338 520 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 GABRA4P48169 554 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 EMDP50402 254 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 CDH11P55287 796 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 WNT4P56705 351 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 IGLV3-21P80748 117 aaPredicted RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 TMEM44Q2T9K0 475 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 FLYWCH1Q4VC44 716 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 LIPKQ5VXJ0 399 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 ZC3H14Q6PJT7 736 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 OR9Q1Q8NGQ5 310 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 BRIX1Q8TDN6 353 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 RIT1Q92963 219 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 TRMT61AQ96FX7 289 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 CHCHD3Q9NX63 227 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 IL20RAQ9UHF4 553 aa23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 MRPS33Q9Y291 106 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 EXOSC1Q9Y3B2 195 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-201ENST00000250489 HRO43593 1189 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 CTNSO60931 367 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 S100A5P33763 92 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 MAT1AQ00266 395 aaKnown RBP23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 STX4Q12846 297 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 ZNF595Q8IYB9 648 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 PFN4Q8NHR9 129 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 RFKQ969G6 155 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 ZNF285Q96NJ3 590 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 ASPNQ9BXN1 380 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 DPH1Q9BZG8 443 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 FBXL21Q9UKT6 434 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 PEX16Q9Y5Y5 336 aa23.33■■□□□ 1.33
TMEM55B-201ENST00000250489 HYKKA2RU49 373 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 NSA2O95478 260 aaKnown RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 HMGN1P05114 100 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 GUSBP08236 651 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 ZGLP1P0C6A0 271 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 CPEP16870 476 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 MAKP20794 623 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 DRD5P21918 477 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 GCGRP47871 477 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 RFX3P48380 749 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms