RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SMARCD2Q92925 531 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 DPCDQ9BVM2 203 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 HCAR1Q9BXC0 346 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 ISG20L2Q9H9L3 353 aaKnown RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 GALNT9Q9HCQ5 603 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 MRPS30Q9NP92 439 aaKnown RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 A0A0G2JPF8 293 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 FAM183AA6NL82 134 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 GRXCR1A8MXD5 290 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 B4DXG7 233 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 HNRNPCL3B7ZW38 293 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CASC3O15234 703 aaKnown RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 HRO43593 1189 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SSNA1O43805 119 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 HNRNPCL4P0DMR1 293 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PRG2P13727 222 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CELP19835 753 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 IGFALSP35858 605 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SLC1A3P43003 542 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 POU6F2P78424 691 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 TSPAN31Q12999 210 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ASAH1Q13510 395 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CAMK2BQ13554 666 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ZNF791Q3KP31 576 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 ZNF425Q6IV72 752 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 DNAJC5GQ8N7S2 189 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 OR2L5Q8NG80 312 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 RSPH9Q9H1X1 276 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 PPP1R3EQ9H7J1 279 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CD93Q9NPY3 652 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 NANSQ9NR45 359 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PTGFRNQ9P2B2 879 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CSNK1G3Q9Y6M4 447 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CIB4A0PJX0 185 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CHURC1-FNTBB4DL54 471 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 C1QTNF3-AMACRE9PGA6 284 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 PRR23D1E9PI22 279 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 C5orf67F2Z3F1 127 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SOCS6O14544 535 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 POLR1CO15160 346 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 RPN2P04844 631 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 PRR23D2P0DMB1 279 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 NAT1P18440 290 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 PPP2R1BP30154 601 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 ZNF136P52737 540 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SMIM11AP58511 58 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 TAS2R41P59536 307 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 ENPP2Q13822 863 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 LCN1P1Q5VSP4 162 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 BHLHB9Q6PI77 547 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SLC36A4Q6YBV0 504 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 TMEM91Q6ZNR0 172 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NRMQ8IXM6 262 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NUP43Q8NFH3 380 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 FLVCR1-AS1Q8TAF5 88 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SFXN5Q8TD22 340 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RAB7BQ96AH8 199 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SARGQ9BW04 601 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RNF32Q9H0A6 362 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 FBXO34Q9NWN3 711 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NPAP1Q9NZP6 1156 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 ACSL5Q9ULC5 683 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SLC17A4Q9Y2C5 497 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 STON1Q9Y6Q2 735 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CD8B2A6NJW9 211 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 P2RX6O15547 441 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 KAT7O95251 611 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 SYPP08247 313 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CD8BP10966 210 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NTSP30990 170 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RAB14P61106 215 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 STXBP1P61764 594 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 MAPK14Q16539 360 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 NDUFA9Q16795 377 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 TMEM35AQ53FP2 167 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 KLHL12Q53G59 568 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CCNJQ5T5M9 372 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 HEPHL1Q6MZM0 1159 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 RASSF6Q6ZTQ3 369 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 OR4N5Q8IXE1 308 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 ATF6BQ99941 703 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 PRSS27Q9BQR3 290 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 MED18Q9BUE0 208 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 FGF22Q9HCT0 170 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 C20orf141Q9NUB4 165 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 IL20Q9NYY1 176 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 EIF3KQ9UBQ5 218 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 CBLCQ9ULV8 474 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 PPIEQ9UNP9 301 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 CLCA2Q9UQC9 943 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 MAU2Q9Y6X3 613 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 CACNA1IQ9P0X4 2223 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 MAP1BP46821 2468 aaKnown RBP9.43□□□□□ -0.9
COPB1-201ENST00000249923 POM121CA8CG34 1229 aa9.43□□□□□ -0.9
COPB1-201ENST00000249923 HPGDSO60760 199 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms