RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 TMEM255BQ8WV15 326 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 MMABQ96EY8 250 aaPredicted RBP21.22■□□□□ 0.99
HOXD9-201ENST00000249499 MND1Q9BWT6 205 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 IRAK4Q9NWZ3 460 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 LRIT1Q9P2V4 623 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 NTNG1Q9Y2I2 539 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 LSM2Q9Y333 95 aaKnown RBP21.22■□□□□ 0.99
HOXD9-201ENST00000249499 CDH10Q9Y6N8 788 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 RNF215Q9Y6U7 377 aa21.22■□□□□ 0.99
HOXD9-201ENST00000249499 K7ESF4 209 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 FOXD2O60548 495 aaPredicted RBP21.21■□□□□ 0.99
HOXD9-201ENST00000249499 BCKDHBP21953 392 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 HTR2AP28223 471 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 GPR3P46089 330 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 LIMK1P53667 647 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 MLLT10P55197 1068 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 ZNF620Q6ZNG0 422 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 OR8D4Q8NGM9 314 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 DACH2Q96NX9 599 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 RBCK1Q9BYM8 510 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 OCEL1Q9H607 264 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 SEMA5BQ9P283 1151 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 PCDHGA3Q9Y5H0 932 aa21.21■□□□□ 0.99
HOXD9-201ENST00000249499 CCRL2O00421 344 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 GADD45AP24522 165 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 PPM1FP49593 454 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 LSM3P62310 102 aaKnown RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 MED22Q15528 200 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 UBALD2Q8IYN6 164 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 KBTBD8Q8NFY9 601 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 OR51Q1Q8NH59 317 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 OIT3Q8WWZ8 545 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 RPL3LQ92901 407 aaKnown RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 AHCYL2Q96HN2 611 aaKnown RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 G6PC3Q9BUM1 346 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 DSN1Q9H410 356 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 Q9N2J8 555 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 FBXO8Q9NRD0 319 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 UCKL1Q9NWZ5 548 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 TMEM5Q9Y2B1 443 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 A3GALT2U3KPV4 340 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 KNL1Q8NG31 2342 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 SCN2AQ99250 2005 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 KDM4EB2RXH2 506 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 SDC3O75056 442 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 LYPD3O95274 346 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 NADKO95544 446 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 SCG5P05408 212 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 ADRA2AP08913 450 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 MAT1AQ00266 395 aaKnown RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 RAB40BQ12829 278 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 ZNF141Q15928 474 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 C11orf91Q3C1V1 193 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 ADCK1Q86TW2 530 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 PLXDC1Q8IUK5 500 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 CMIPQ8IY22 773 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 NANOGP1Q8N7R0 232 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 SH3YL1Q96HL8 342 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 HS6ST2Q96MM7 605 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 OR5M11Q96RB7 305 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 TAPBPLQ9BX59 468 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 COL25A1Q9BXS0 654 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 WDR12Q9GZL7 423 aaKnown RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 DCSTAMPQ9H295 470 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 TMEM27Q9HBJ8 222 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 HMG20AQ9NP66 347 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 ZNF223Q9UK11 482 aaPredicted RBP21.2■□□□□ 0.98
HOXD9-201ENST00000249499 B3GNT3Q9Y2A9 372 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 MMACHCQ9Y4U1 282 aa21.2■□□□□ 0.98
HOXD9-201ENST00000249499 IGHV1OR21-1A0A087WYE8 117 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 RAB36O95755 333 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 HMGN1P05114 100 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 CD1CP29017 333 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 GPLD1P80108 840 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 HSD11B2P80365 405 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 ZNF846Q147U1 533 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 MINDY4Q4G0A6 757 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 C3orf38Q5JPI3 329 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 RPL13AP3Q6NVV1 102 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 ARHGAP22Q7Z5H3 698 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 BRIX1Q8TDN6 353 aaKnown RBP21.19■□□□□ 0.98
HOXD9-201ENST00000249499 TMEM239Q8WW34 195 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 FGF20Q9NP95 211 aaPredicted RBP21.19■□□□□ 0.98
HOXD9-201ENST00000249499 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.19■□□□□ 0.98
HOXD9-201ENST00000249499 PRODH2Q9UF12 536 aa21.19■□□□□ 0.98
HOXD9-201ENST00000249499 GON4LQ3T8J9 2241 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 CLDN25C9JDP6 229 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 DUX1O43812 170 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 PRG2P13727 222 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 GLB1P16278 677 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 ENDOUP21128 410 aaKnown RBP21.18■□□□□ 0.98
HOXD9-201ENST00000249499 RAB15P59190 212 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 PRKCDQ05655 676 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 C1DQ13901 141 aaKnown RBP21.18■□□□□ 0.98
HOXD9-201ENST00000249499 COL9A2Q14055 689 aaPredicted RBP21.18■□□□□ 0.98
HOXD9-201ENST00000249499 MAMSTRQ6ZN01 415 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 OR7G1Q8NGA0 311 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 RFKQ969G6 155 aa21.18■□□□□ 0.98
HOXD9-201ENST00000249499 OR1F2PQ96R84 312 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms