RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TAPBPLQ9BX59 468 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 DPH1Q9BZG8 443 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ATP13A2Q9NQ11 1180 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 HCN3Q9P1Z3 774 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 KCNE5Q9UJ90 142 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 UGT2A1Q9Y4X1 527 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 SYT5O00445 386 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ASNA1O43681 348 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 PRKNO60260 465 aaPredicted RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ALOX5P09917 674 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 GABRA3P34903 492 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 LARS2Q15031 903 aaKnown RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 NDUFA9Q16795 377 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 MRPL2Q5T653 305 aaKnown RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 RSBN1Q5VWQ0 802 aaPredicted RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 POC5Q8NA72 575 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ANKK1Q8NFD2 765 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 PFN4Q8NHR9 129 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 RACGAP1Q9H0H5 632 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 MTHFD2LQ9H903 347 aaPredicted RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 C14orf119Q9NWQ9 140 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 SATB2Q9UPW6 733 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 PLD2O14939 933 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 TNFSF14O43557 240 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 PSMA1P25786 263 aaKnown RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 MAOBP27338 520 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 TSPAN31Q12999 210 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 C1DQ13901 141 aaKnown RBP14.67□□□□□ -0.06
LRFN1-201ENST00000248668 CCINQ13939 588 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 OCLNQ16625 522 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 FLYWCH1Q4VC44 716 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF628Q5EBL2 1059 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 DCST2Q5T1A1 773 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 STEAP3Q658P3 488 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 GRHL3Q8TE85 626 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 SAMD8Q96LT4 415 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ERVK13-1Q9NX77 482 aa14.67□□□□□ -0.06
LRFN1-201ENST00000248668 ABCA7Q8IZY2 2146 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ASXL3Q9C0F0 2248 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 LINC00854A0A1B0GVQ3 168 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ZC3H12DA2A288 527 aaKnown RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 RAB36O95755 333 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 MYL12AP19105 171 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 GSTM3P21266 225 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF10P21506 573 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 PRKAR1BP31321 381 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 SOX6P35712 828 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 MAT1AQ00266 395 aaKnown RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 RHAGQ02094 409 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 TIMM50Q3ZCQ8 353 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 MEDAGQ5VYS4 303 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 CEP19Q96LK0 163 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 TM9SF2Q99805 663 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 GSDMCQ9BYG8 508 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 A0A0A6YYC8 382 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 A0A0J9YY10 115 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 SHISA7A6NL88 538 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 A8MV72 311 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 I3L1I5 382 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 GNB5O14775 395 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 CLEC2LP0C7M8 214 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 AZGP1P25311 298 aaKnown RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 IFNGR2P38484 337 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 YPEL5P62699 121 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF155Q12901 538 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 FZD2Q14332 565 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 FCRLBQ6BAA4 426 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 C22orf42Q6IC83 251 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 HEPHL1Q6MZM0 1159 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 WDR88Q6ZMY6 472 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 USP53Q70EK8 1073 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 TMEM163Q8TC26 289 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ACOT11Q8WXI4 607 aaPredicted RBP14.66□□□□□ -0.06
LRFN1-201ENST00000248668 OMA1Q96E52 524 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF576Q9H609 170 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 MED20Q9H944 212 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 SPEF1Q9Y4P9 236 aa14.66□□□□□ -0.06
LRFN1-201ENST00000248668 PRAMEF26H0Y7S4 382 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 HRKO00198 91 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 OR10H2O60403 315 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 TSPAN9O75954 239 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SPNP16150 400 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ATP6V1E1P36543 226 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 RABIFP47224 123 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ARFIP1P53367 373 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ARMC6Q6NXE6 501 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CD300LDQ6UXZ3 194 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 GATAD2AQ86YP4 633 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 PHC2Q8IXK0 858 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SYT14Q8NB59 555 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 GPBAR1Q8TDU6 330 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 TM9SF4Q92544 642 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ART5Q96L15 291 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SLC38A2Q96QD8 506 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 BARHL1Q9BZE3 327 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 TRIM45Q9H8W5 580 aaPredicted RBP14.65□□□□□ -0.06
LRFN1-201ENST00000248668 C20orf141Q9NUB4 165 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 VPS13AQ96RL7 3174 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CRYZL1O95825 349 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 TSPAN19P0C672 248 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms