RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CLCA3PQ9Y6N3 262 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 PRKAR1BP31321 381 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 ADPRHP54922 357 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 CD83Q01151 205 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 TFF2Q03403 129 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF776Q68DI1 518 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-201ENST00000248139 FIGNL1Q6PIW4 674 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 ASPGQ86U10 573 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 UBQLN3Q9H347 655 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 K7EQS6 105 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 REM1O75628 298 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 IFNA8P32881 189 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 FXYD6P3P58550 94 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 IL18Q14116 193 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 DECR1Q16698 335 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 ZC3H14Q6PJT7 736 aaKnown RBP23.79■■□□□ 1.4
RAB40C-201ENST00000248139 ARIH2OSQ8N7S6 290 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 ATF6BQ99941 703 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 SRMSQ9H3Y6 488 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 KCMF1Q9P0J7 381 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 LRRC72A6NJI9 287 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 PVRP15151 417 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 POLR2CP19387 275 aaPredicted RBP23.79■■□□□ 1.4
RAB40C-201ENST00000248139 MAKP20794 623 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 TBXA2RP21731 343 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 HTR2AP28223 471 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 STAT5AP42229 794 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF136P52737 540 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 SLC16A1P53985 500 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 ASAH1Q13510 395 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 CEBPEQ15744 281 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 KLHL12Q53G59 568 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 FAM27D1Q5T7N8 215 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 IL20RBQ6UXL0 311 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 Q8N402 240 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 OR5T3Q8NGG3 340 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 PATE1Q8WXA2 126 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 TMEM168Q9H0V1 697 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 H2AFY2Q9P0M6 372 aaPredicted RBP23.79■■□□□ 1.4
RAB40C-201ENST00000248139 TNFRSF10DQ9UBN6 386 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 KCNE5Q9UJ90 142 aa23.79■■□□□ 1.4
RAB40C-201ENST00000248139 KLF4O43474 513 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 CTBP2P56545 445 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 DUSP6Q16828 381 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 CXXC5Q7LFL8 322 aaKnown RBP23.78■■□□□ 1.4
RAB40C-201ENST00000248139 NR2C2APQ86WQ0 139 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 OR2T33Q8NG76 320 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 HERVK_113Q902F9 699 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 MYADMQ96S97 322 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 SDF2Q99470 211 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 MRPL3P09001 348 aaKnown RBP23.78■■□□□ 1.4
RAB40C-201ENST00000248139 SLC2A2P11168 524 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-201ENST00000248139 SPTBP11277 2137 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 NDUFV2P19404 249 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 COL9A1P20849 921 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 MYL9P24844 172 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 ACTR1BP42025 376 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 ACTR1AP61163 376 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 TMEM196Q5HYL7 178 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 HEPHL1Q6MZM0 1159 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 CD200R1LQ6Q8B3 271 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 TMEM91Q6ZNR0 172 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 KLHL36Q8N4N3 616 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 TMEM99Q8N816 258 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 TMEM52Q8NDY8 209 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 OR4K14Q8NGD5 310 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 RFKQ969G6 155 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 MS4A4EQ96PG1 132 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 SFXN1Q9H9B4 322 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 MOV10Q9HCE1 1003 aaKnown RBP23.78■■□□□ 1.4
RAB40C-201ENST00000248139 GDE1Q9NZC3 331 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 CALML5Q9NZT1 146 aa23.78■■□□□ 1.4
RAB40C-201ENST00000248139 GSAPA4D1B5 854 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 C12orf71A8MTZ7 269 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 ATXN8OSP0DMR3 200 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 TNFRSF17Q02223 184 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 SRSF5Q13243 272 aaKnown RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 DSG2Q14126 1118 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 CCDC92Q53HC0 331 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 EOGTQ5NDL2 527 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PRAMEF8Q5VWM4 474 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PRAMEF7Q5VXH5 474 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 CDC73Q6P1J9 531 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PEX5LQ8IYB4 626 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 FRMD1Q8N878 549 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 GDPD1Q8N9F7 314 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 GAL3ST3Q96A11 431 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 OR2M4Q96R27 311 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PRSS27Q9BQR3 290 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 TTTY10Q9BZA0 68 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 RNF32Q9H0A6 362 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PPIL3Q9H2H8 161 aaKnown RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 OR52D1Q9H346 318 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 MTHFD2LQ9H903 347 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 RWDD3Q9Y3V2 267 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 COLEC10Q9Y6Z7 277 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 LAMA1P25391 3075 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 TRDV1A0A1B0GX56 115 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 LINC01565O15544 149 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 CLUP10909 449 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms