RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 UBE2Q1Q7Z7E8 422 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 PDXPQ96GD0 296 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 LYSMD1Q96S90 227 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 APOOQ9BUR5 198 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
NCLN-201ENST00000246117 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
NCLN-201ENST00000246117 PPIL3Q9H2H8 161 aaKnown RBP12.85□□□□□ -0.35
NCLN-201ENST00000246117 ATP5A1P25705 553 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 KCNJ5P48544 419 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 TRMT12Q53H54 448 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 ESPNLQ6ZVH7 1005 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 OR52I1Q8NGK6 324 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 OR9A4Q8NGU2 314 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 EFHD2Q96C19 240 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 PRRC1Q96M27 445 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 DPCDQ9BVM2 203 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 FN3KQ9H479 309 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 RNF121Q9H920 327 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 Q9N2J8 555 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 SOBPA7XYQ1 873 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 A8MVJ9 347 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 LRRN3E7EW58 273 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 H7C1C5 153 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 STAT5AP42229 794 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 LCN6P62502 163 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 CCDC71Q8IV32 467 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 LMX1AQ8TE12 382 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 OR10A4Q9H209 315 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 LRRN3Q9H3W5 708 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 SYNPO2LQ9H987 977 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 PLSCR3Q9NRY6 295 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 FOXE1O00358 373 aaPredicted RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 CDC40O60508 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
NCLN-201ENST00000246117 SNTB2Q13425 540 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 C4orf46Q504U0 113 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 C1orf189Q5VU69 101 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 TMPRSS12Q86WS5 348 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 WDR92Q96MX6 357 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 SERGEFQ9UGK8 458 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 LIPT1Q9Y234 373 aa12.84□□□□□ -0.35
NCLN-201ENST00000246117 FARSAQ9Y285 508 aaKnown RBP12.84□□□□□ -0.35
NCLN-201ENST00000246117 MEN1O00255 615 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 CSRP3P50461 194 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 BAK1Q16611 211 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 AGAP7PQ5VUJ5 663 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 PHC2Q8IXK0 858 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NATD1Q8N6N6 113 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 TRMT10AQ8TBZ6 339 aaKnown RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NEURL3Q96EH8 262 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 PLA2G12AQ9BZM1 189 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 B3GNT3Q9Y2A9 372 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 A0A0G2JPF8 293 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 RHPN2P1A8MT19 583 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 HNRNPCL3B7ZW38 293 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 PEX12O00623 359 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 UBXN7O94888 489 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 CHRM4P08173 479 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 HNRNPCL4P0DMR1 293 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 IL12BP29460 328 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 RPS27P42677 84 aaKnown RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 PPP3R1P63098 170 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 ERVK-25P63136 954 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 SUN5Q8TC36 379 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NSMAFQ92636 917 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 YIPF6Q96EC8 236 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NAALAD2Q9Y3Q0 740 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 HEBP2Q9Y5Z4 205 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 KDM4BO94953 1096 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 DBIP07108 87 aaKnown RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 FNTBP49356 437 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 NXNL2Q5VZ03 156 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 TECPR1Q7Z6L1 1165 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 KLHDC8BQ8IXV7 354 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 ARL14Q8N4G2 192 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 BPIFA2Q96DR5 249 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms