RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 EXO1Q9UQ84 846 aaKnown RBP12.46□□□□□ -0.42
DDX39A-201ENST00000242776 CCL27Q9Y4X3 112 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 PRAMEF25A6NGN4 478 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 C17orf51A8MQB3 221 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 PEX11AO75192 247 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 CBR3O75828 277 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 FAM107AO95990 144 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 PCSK2P16519 638 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 EPHA3P29320 983 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 IDH3AP50213 366 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 XKP51811 444 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 GFRA1P56159 465 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 CLDN18P56856 261 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 RPL38P63173 70 aaKnown RBP12.45□□□□□ -0.42
DDX39A-201ENST00000242776 FUT7Q11130 342 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 VEZF1Q14119 521 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 OR52E8Q6IFG1 317 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 FAM180BQ6P0A1 224 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 MAVSQ7Z434 540 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 C1orf52Q8N6N3 182 aaKnown RBP12.45□□□□□ -0.42
DDX39A-201ENST00000242776 FIG4Q92562 907 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 CTHRC1Q96CG8 243 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 NTNG2Q96CW9 530 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 ELAC2Q9BQ52 826 aaKnown RBP12.45□□□□□ -0.42
DDX39A-201ENST00000242776 AKTIPQ9H8T0 292 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 TRIM33Q9UPN9 1127 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 PCNX3Q9H6A9 2034 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
DDX39A-201ENST00000242776 GOLGA8QA0A0J9YX86 632 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 GOLGA8OA6NCC3 632 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 SLC22A20A6NK97 555 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 GOLGA8NF8WBI6 632 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 H0YC42 278 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 PCDH7O60245 1069 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 TIA1P31483 386 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 GALNSP34059 522 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 FEN1P39748 380 aaKnown RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 GSTM5P46439 218 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 OGFOD2Q6N063 350 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 PPP4R4Q6NUP7 873 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 LARP4Q71RC2 724 aaKnown RBP eCLIP12.44□□□□□ -0.425e-6■■■□□ 15.1
DDX39A-201ENST00000242776 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 COMMD6Q7Z4G1 85 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 FAM9CQ8IZT9 166 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 OR4K14Q8NGD5 310 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 APIPQ96GX9 242 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 ZNF845Q96IR2 970 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 MARK4Q96L34 752 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 UCN2Q96RP3 112 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 WDR55Q9H6Y2 383 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 YAE1D1Q9NRH1 226 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 SIRT5Q9NXA8 310 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
DDX39A-201ENST00000242776 MCM8Q9UJA3 840 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 ABCA1O95477 2261 aa12.44□□□□□ -0.42
DDX39A-201ENST00000242776 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 SEC14L5O43304 696 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 SNX3O60493 162 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 C8BP07358 591 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 PRPS2P11908 318 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 CPMP14384 443 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 ZNF708P17019 499 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 CHMP24386 653 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 KIR2DL2P43627 348 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 EMX2Q04743 252 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 CAPRIN1Q14444 709 aaKnown RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 LSM12Q3MHD2 195 aaKnown RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 GALNT18Q6P9A2 607 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 PLCZ1Q86YW0 608 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 MEIOBQ8N635 442 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 OR5M1Q8NGP8 315 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 C10orf82Q8WW14 230 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 CCT8L2Q96SF2 557 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 SLC39A3Q9BRY0 314 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 DDX31Q9H8H2 851 aaKnown RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 ANKRA2Q9H9E1 313 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 MRGBPQ9NV56 204 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 ASIC5Q9NY37 505 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 DLGAP4Q9Y2H0 992 aa12.43□□□□□ -0.42
DDX39A-201ENST00000242776 POLR3HQ9Y535 204 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-201ENST00000242776 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 UBDO15205 165 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 GUCY1B2O75343 617 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 ERAL1O75616 437 aaKnown RBP12.42□□□□□ -0.42
DDX39A-201ENST00000242776 REM1O75628 298 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 KLK1P06870 262 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 S1PR1P21453 382 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 SRD5A2P31213 254 aa12.42□□□□□ -0.42
DDX39A-201ENST00000242776 TRA2BP62995 288 aaKnown RBP12.42□□□□□ -0.42
DDX39A-201ENST00000242776 EEF1A1P68104 462 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms