RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GRAMD2AQ8IUY3 354 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 AMER2Q8N7J2 671 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 NFAM1Q8NET5 270 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CNOT9Q92600 299 aaKnown RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ULBP3Q9BZM4 244 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ANKRD19PQ9H560 264 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 WDR54Q9H977 334 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 PARD6AQ9NPB6 346 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 A0A087WUU8 490 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 TRIM64A6NGJ6 449 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 OR6C76A6NM76 312 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 OR5F1O95221 314 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 IL33O95760 270 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CYC1P08574 325 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 HTR2AP28223 471 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ETV5P41161 510 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 PSMD4P55036 377 aaKnown RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CD47Q08722 323 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 FGFBP1Q14512 234 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 TRAM2Q15035 370 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ISXQ2M1V0 245 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 KCTD21Q4G0X4 260 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CDCP2Q5VXM1 449 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 KLHL17Q6TDP4 642 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF517Q6ZMY9 492 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 PLEKHM3Q6ZWE6 761 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 RANBP3LQ86VV4 465 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 LINC00471Q8N535 108 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF614Q8N883 585 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 OR4K5Q8NGD3 323 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 METTL21AQ8WXB1 218 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 EFHD2Q96C19 240 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 HRASLS5Q96KN8 279 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 GAL3ST4Q96RP7 486 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CRB3Q9BUF7 120 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 SEMA4CQ9C0C4 833 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 NRSN2Q9GZP1 204 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 WWTR1Q9GZV5 400 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 EVA1AQ9H8M9 152 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 LOXL2Q9Y4K0 774 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 GMPPBQ9Y5P6 360 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 B3GALT1Q9Y5Z6 326 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 A6NHS1 94 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 SAGE2PA6NJ88 616 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 TO15178 435 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 FMO6PO60774 539 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 ELK4P28324 431 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 IFNA8P32881 189 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 TPD52P55327 224 aaPredicted RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 CLDN6P56747 220 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 APOFQ13790 326 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 CTU2Q2VPK5 515 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 KLHL26Q53HC5 615 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 TMEM205Q6UW68 189 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 GDF7Q7Z4P5 450 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 ZER1Q7Z7L7 766 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 CCDC71Q8IV32 467 aaPredicted RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF441Q8N8Z8 693 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 APCDD1LQ8NCL9 501 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 B3GNT7Q8NFL0 401 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 SLC41A3Q96GZ6 507 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 WDR77Q9BQA1 342 aaPredicted RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 DGCR6LQ9BY27 220 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 YTHDF1Q9BYJ9 559 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 STRADBQ9C0K7 418 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 POLR2J2Q9GZM3 115 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 ING2Q9H160 280 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 POLR2J3Q9H1A7 115 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 TOR4AQ9NXH8 423 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 DNAJB12Q9NXW2 375 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF223Q9UK11 482 aaPredicted RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 NXT1Q9UKK6 140 aaKnown RBP14.03□□□□□ -0.16
HDHD3-201ENST00000238379 DPPA5A6NC42 116 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 TGM1P22735 817 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 TARDBPQ13148 414 aaKnown RBP eCLIP14.02□□□□□ -0.16
HDHD3-201ENST00000238379 MEP1AQ16819 746 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 ZSWIM7Q19AV6 140 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 HLA-DQA1Q5Y7H0 255 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 LAIR2Q6ISS4 152 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 C1orf94Q6P1W5 598 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 Q6ZPB1 254 aaPredicted RBP14.02□□□□□ -0.16
HDHD3-201ENST00000238379 RAB11FIP2Q7L804 512 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 SLC29A4Q7RTT9 530 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 CMIPQ8IY22 773 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 SETD9Q8NE22 299 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 PRSS33Q8NF86 280 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 MR1Q95460 341 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 UCK2Q9BZX2 261 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 TESQ9UGI8 421 aaKnown RBP14.02□□□□□ -0.16
HDHD3-201ENST00000238379 HSPE1-MOB4S4R3N1 261 aa14.02□□□□□ -0.16
HDHD3-201ENST00000238379 TEX51A0A1B0GUA7 166 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 CDC14CA4D256 554 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 TRAPPC13A5PLN9 417 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms