RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CRYM-AS1A6NIL9 109 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 ADRB3P13945 408 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 LILRA4P59901 499 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 RAB11BQ15907 218 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 GRAMD2AQ8IUY3 354 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 TFGQ92734 400 aaPredicted RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 NTAN1Q96AB6 310 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 ZUFSPQ96AP4 578 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 NANOGQ9H9S0 305 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SHPKQ9UHJ6 478 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SALL4Q9UJQ4 1053 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 TP53TG5Q9Y2B4 290 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SLC7A4O43246 635 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 RAD1O60671 282 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 ADORA3P0DMS8 318 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SLAMF1Q13291 335 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SLC36A3Q495N2 470 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 CERS6Q6ZMG9 384 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■■■■ 51
MSH6-201ENST00000234420 ZNF768Q9H5H4 540 aaKnown RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 AIG1Q9NVV5 245 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 HSF1Q00613 529 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 PMPCAQ10713 525 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 GBX1Q14549 363 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SYT14Q8NB59 555 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SFXN2Q96NB2 322 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SDCBP2Q9H190 292 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 NWD2Q9ULI1 1742 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SMLR1H3BR10 107 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 CBX7O95931 251 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 MTHFD2P13995 350 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 ACVRL1P37023 503 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 SF3A2Q15428 464 aaKnown RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 C18orf63Q68DL7 685 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 RNF130Q86XS8 419 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 OR10Z1Q8NGY1 313 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 C10orf90Q96M02 699 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
MSH6-201ENST00000234420 FBXL2Q9UKC9 423 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 POU3F2P20265 443 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 PTTG1IPP53801 180 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 IL13RA1P78552 427 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SLC27A4Q6P1M0 643 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 FJX1Q86VR8 437 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 C1orf52Q8N6N3 182 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 RNF170Q96K19 258 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 FAM103A1Q9BTL3 118 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 ST6GALNAC5Q9BVH7 336 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 KCNIP1Q9NZI2 227 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TRGV8A0A0C4DH27 118 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 GDF10P55107 478 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 NTHL1P78549 312 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SORDQ00796 357 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 BCL7AQ4VC05 210 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SPANXN4Q5MJ08 99 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TMEM150AQ86TG1 271 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SGPP2Q8IWX5 399 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 GLYATL1Q969I3 302 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 IL23AQ9NPF7 189 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SLC2A8Q9NY64 477 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 LTN1O94822 1766 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TRBV11-1A0A0K0K1C0 115 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 CXorf49A8MYA2 514 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 RAB3DO95716 219 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 ITGB2P05107 769 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 PNLIPRP1P54315 467 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 LRIF1Q5T3J3 769 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SLC39A5Q6ZMH5 540 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 PRR7Q8TB68 274 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 HHIPL1Q96JK4 782 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 SLC6A17Q9H1V8 727 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 OR51B5Q9H339 312 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TMEM181Q9P2C4 612 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 IGHV3-64DA0A0J9YX35 117 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 AGAP14A8MT82 685 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 LEFTY1O75610 366 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 CHRM4P08173 479 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 IL1R2P27930 398 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 METTL2BQ6P1Q9 378 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 OR10R2Q8NGX6 335 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 ADAMTS19Q8TE59 1207 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 TM9SF4Q92544 642 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 RAB11FIP5Q9BXF6 653 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 MROQ9BYG7 248 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 VSX1Q9NZR4 365 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 PTPRMP28827 1452 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 LY86O95711 162 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 NME2P22392 152 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms