RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GSNP06396 782 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 SNRPB2P08579 225 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 MSX1P28360 303 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 PTGS2P35354 604 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 GANABQ14697 944 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 SF3B4Q15427 424 aaKnown RBP eCLIP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 ARHGAP11BQ3KRB8 267 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 FLYWCH1Q4VC44 716 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 TRILQ7L0X0 811 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 MTERF4Q7Z6M4 381 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 RNF130Q86XS8 419 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 SPPL2CQ8IUH8 684 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 FUNDC1Q8IVP5 155 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 CHDHQ8NE62 594 aaPredicted RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 OR52N2Q8NGI0 321 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 OR5D16Q8NGK9 328 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 RNF138Q8WVD3 245 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 GTF2H4Q92759 462 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 PMM1Q92871 262 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 GNRHR2Q96P88 292 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 INPP5KQ9BT40 448 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 TPT1P8Q9HAU6 139 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 CACYBPQ9HB71 228 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 GALNT9Q9HCQ5 603 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 SERHLQ9NQF3 203 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 CALML5Q9NZT1 146 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 SUCOQ9UBS9 1254 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 DKKL1Q9UK85 242 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 MRPS18CQ9Y3D5 142 aaKnown RBP10.29□□□□□ -0.76
SF3B6-201ENST00000233468 CELSR1Q9NYQ6 3014 aa10.29□□□□□ -0.76
SF3B6-201ENST00000233468 CPAMD8Q8IZJ3 1885 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 TRGV8A0A0C4DH27 118 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 A0A1B0GTH9 108 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 EVPLLA8MZ36 301 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 AQP7O14520 342 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 PDE9AO76083 593 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 OXSR1O95747 527 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ANGPTL1O95841 491 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 IGKV1D-16P01601 117 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 STSP08842 583 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 OR12D1P0DN82 309 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 PRF1P14222 555 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 PTPN6P29350 595 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 SRD5A2P31213 254 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 LSP1P33241 339 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 PTGDSP41222 190 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 CDKN2CP42773 168 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 CRATP43155 626 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ZFP36L2P47974 494 aaKnown RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ATP12AP54707 1039 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 DSCR4P56555 118 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 RPS26P62854 115 aaKnown RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 GNGT1P63211 74 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 FADDQ13158 208 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ZNF630Q2M218 657 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 GRAMD1BQ3KR37 738 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 GPAT3Q53EU6 434 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 HEPHL1Q6MZM0 1159 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 TNFAIP8L2Q6P589 184 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 AAGABQ6PD74 315 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 DNAJC14Q6Y2X3 702 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 SPATA21Q7Z572 469 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 CLEC4FQ8N1N0 589 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ZFP90Q8TF47 636 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 DUSP19Q8WTR2 217 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 NTNG2Q96CW9 530 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 TRNT1Q96Q11 434 aaKnown RBP10.28□□□□□ -0.76
SF3B6-201ENST00000233468 SDF2Q99470 211 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 NMUR2Q9GZQ4 415 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 UBQLN3Q9H347 655 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 STOML1Q9UBI4 398 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 P2RX2Q9UBL9 471 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 ACAD8Q9UKU7 415 aa10.28□□□□□ -0.76
SF3B6-201ENST00000233468 CSMD2Q7Z408 3487 aa10.27□□□□□ -0.76
SF3B6-201ENST00000233468 PCNX1Q96RV3 2341 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 A0A087WZY1 265 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 FIGNL2A6NMB9 653 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ENO4A6NNW6 628 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 BBIP1A8MTZ0 92 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 LINC01387J3KSC0 135 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 GTPBP1O00178 669 aaKnown RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 CLIC1O00299 241 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 LRRTM2O43300 516 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 HOXD4P09016 255 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 NR2F1P10589 423 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 ESRRAP11474 423 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 PTGER4P35408 488 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 GAS1P54826 345 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 STX5Q13190 355 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 MMEL1Q495T6 779 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 GLYR1Q49A26 553 aaPredicted RBP10.27□□□□□ -0.77
SF3B6-201ENST00000233468 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 COQ5Q5HYK3 327 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 LRIF1Q5T3J3 769 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 CCNJQ5T5M9 372 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 WLSQ5T9L3 541 aa10.27□□□□□ -0.77
SF3B6-201ENST00000233468 FNDC7Q5VTL7 733 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms