RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 BollQ924M5 281 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Sntg1Q925E1 517 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ppp2r2dQ925E7 453 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 2410137M14RikQ9CWF0 162 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fam166aQ9D4K5 319 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zswim2Q9D9X6 631 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Szt2A2A9C3 3431 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Snrnp200Q6P4T2 2136 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm13539A0A1B0GSM6 183 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1366A0A1W2P740 328 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fnd3c2A2AP83 941 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Wdr76A6PWY4 622 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Esp22A8R0V4 111 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ankle1A8VU90 534 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Lgals7O54974 136 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Nfatc1O88942 717 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TtkP35761 856 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 AcadmP45952 421 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 HgfQ08048 728 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 UbqlnlQ14DL0 610 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Znf182Q6P560 627 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr855Q7TRF8 312 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fam92aQ8BP22 355 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Poglut1Q8BYB9 392 aaKnown RBP9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Eri3Q8C460 337 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Aoc1Q8JZQ5 751 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Spns1Q8R0G7 528 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr853Q8VGG6 305 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Abcg5Q99PE8 652 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Acad8Q9D7B6 413 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Akr1a1Q9JII6 325 aa9.2□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ppp1r3dA2AJW4 279 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Sult3a2G5E904 293 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ccrl2O35457 360 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 CgaP01216 120 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Amd1P0DMN7 334 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cdh26P59862 763 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 UrodP70697 367 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mrpl10Q3TBW2 262 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Crtc2Q3U182 692 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dtx3lQ3UIR3 748 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Thoc6Q5U4D9 341 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1275Q7TQY8 312 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Atg4bQ8BGE6 393 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc35f1Q8BGK5 408 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc6a17Q8BJI1 727 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 C130079G13RikQ8BUY2 280 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Catsper4Q8BVN3 442 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Stfa2l1Q8BWM3 103 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 NdnfQ8C119 568 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rad51ap1Q8C551 337 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 EfhbQ8CDU5 853 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gipc3Q8R5M0 297 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr161Q8VGB9 313 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr525Q8VGL5 309 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr668Q8VGW3 318 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rab40bQ8VHP8 278 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pcyt2Q922E4 404 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc35b3Q922Q5 369 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rab28Q99KL7 221 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ankrd10Q99LW0 415 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dnmt3lQ9CWR8 421 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zbtb32Q9JKD9 465 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Syt11Q9R0N3 430 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ckap5A2AGT5 2032 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Nup214Q80U93 2085 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Col24a1Q30D77 1733 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zyg11aA2BFL2 627 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 ComtO88587 265 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 F9P16294 471 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PgfP49764 158 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pitx2P97474 317 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rab33aP97950 237 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 E330014E10RikQ3UL33 481 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 D5Ertd577eQ499F0 481 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Polr2mQ6P6I6 366 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Serpinb9fQ80UK5 377 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mfsd11Q8BJ51 449 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn1r32Q8R2D9 302 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 AspaQ8R3P0 312 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Serpinb9gQ8VHQ1 377 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rpe65Q91ZQ5 533 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc26a5Q99NH7 744 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Bud23Q9CY21 281 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cndp2Q9D1A2 475 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 MmabQ9D273 237 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Actl11Q9D5V1 1207 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mcemp1Q9D8U6 183 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Deaf1Q9Z1T5 566 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Unc13cQ8K0T7 2210 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ice1E9Q286 2241 aaKnown RBP9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1315-ps1A0A140LI66 314 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gsg1lD3Z7H4 322 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gpr137cE9Q343 423 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Stxbp1O08599 594 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pcp2P12660 120 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 RhoP15409 348 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 TrhrP21761 393 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mc3rP33033 323 aa9.19□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dlk1Q09163 385 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms