RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Zc3h14Q8BJ05 735 aaKnown RBP8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr799Q8VGI7 311 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nphs2Q91X05 385 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Atp6v1b1Q91YH6 513 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ndufb2Q9CPU2 105 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tvp23bQ9D8T4 205 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pou5f2Q9DAC9 329 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cacna1gQ5SUF7 2381 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ighv16-1A0A0A6YW39 117 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm13539A0A1B0GSM6 183 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Aadacl2B2RWD2 401 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Itga10E9Q6R1 1167 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn2r35E9Q7U8 861 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zfp105G3X9I0 524 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 PigfO09101 219 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mup4P11590 178 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tnfrsf1bP25119 474 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 CpoxP36552 443 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 ThrbP37242 461 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tm9sf2P58021 662 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Sirt6P59941 334 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hsd17b3P70385 305 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tex52Q3TTI8 308 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Wdr20Q3UWE6 569 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cdkn2dQ60773 166 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Il12rb1Q60837 738 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 WdcpQ6NV72 663 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 DmknQ6P253 517 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Bhlhb9Q6PB60 539 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ugt2a2Q6PDD0 528 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Prss54Q7M756 383 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Edem2Q8BJT9 577 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gen1Q8BMI4 908 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fam131aQ8BWU3 361 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tmem125Q8CHQ6 216 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn1r189Q8K3N3 312 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lrrc61Q8R2R5 259 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fam192aQ91WE2 254 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc7a13Q91WN3 478 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 PrkxQ922R0 355 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dhrs7Q9CXR1 338 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc35a4Q9D321 324 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ankrd22Q9D3J5 191 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kiaa0141Q9DCV6 510 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Popdc3Q9ES81 291 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Phc2Q9QWH1 850 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm7682A0A0J9YUM1 481 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1303A2AVW1 312 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc16a5G5E8K6 468 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn2r109K7N747 858 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 P01735 133 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 H2-T3P14432 384 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 CtsaP16675 474 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 LhcgrP30730 700 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hsf2P38533 535 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dnaja1P63037 397 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Clpsl2Q3UW21 102 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ly6eQ64253 130 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 St8sia1Q64687 355 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rundc3bQ6PDC0 408 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr591Q7TRR7 314 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rap2aQ80ZJ1 183 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ska3Q8C263 411 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Thap1Q8CHW1 210 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Casc3Q8K3W3 698 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dus3lQ91XI1 637 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lrrc49Q91YK0 686 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mri1Q9CQT1 369 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Art4Q9CRA0 300 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Upk1bQ9Z2C6 260 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Minpp1Q9Z2L6 481 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ints1Q6P4S8 2195 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zfp442A2AQA0 667 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm14085A2AWR5 660 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ighg2cF6TQW2 404 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vmn2r31L7N1Z4 861 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Psmd4O35226 376 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hipk1O88904 1210 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 P01864 335 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 P03976 113 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 PpiaP17742 164 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Psmb9P28076 219 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Syt4P40749 425 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hsd11b2P51661 386 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cxcr4P70658 359 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kcnk2P97438 426 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 BcheQ03311 603 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 MitfQ08874 526 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kcnk9Q3LS21 402 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Xrra1Q3U3V8 786 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zmat1Q3V0C1 714 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 MagixQ4KL35 324 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 WhammQ571B6 793 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Map4k2Q61161 821 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pomt2Q8BGQ4 820 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pou6f2Q8BJI4 691 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nceh1Q8BLF1 408 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc35c1Q8BLX4 363 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fignl1Q8BPY9 683 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Catsper4Q8BVN3 442 aa8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms