RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
PHGDH-230ENST00000641927 FAM177BA6PVY3 158 aa21.96■■□□□ 1.11
PHGDH-230ENST00000641927 NBPF7P0C2Y1 421 aaPredicted RBP21.96■■□□□ 1.11
PHGDH-230ENST00000641927 TRIM28Q13263 835 aaKnown RBP21.96■■□□□ 1.11
PHGDH-230ENST00000641927 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
PHGDH-230ENST00000641927 TBC1D9BQ66K14 1250 aa21.96■■□□□ 1.11
PHGDH-230ENST00000641927 UBN2Q6ZU65 1347 aa21.96■■□□□ 1.11
PHGDH-230ENST00000641927 GYS1P13807 737 aa21.95■■□□□ 1.1
PHGDH-230ENST00000641927 JARID2Q92833 1246 aaPredicted RBP21.95■■□□□ 1.1
PHGDH-230ENST00000641927 AAMPQ13685 434 aa21.95■■□□□ 1.1
PHGDH-230ENST00000641927 PARP10Q53GL7 1025 aa21.95■■□□□ 1.1
PHGDH-230ENST00000641927 UBE3BQ7Z3V4 1068 aa21.95■■□□□ 1.1
PHGDH-230ENST00000641927 SETDB2Q96T68 719 aa21.95■■□□□ 1.1
PHGDH-230ENST00000641927 GNAI2P04899 355 aa21.93■■□□□ 1.1
PHGDH-230ENST00000641927 TRMT112Q9UI30 125 aaKnown RBP21.93■■□□□ 1.1
PHGDH-230ENST00000641927 SUSD4Q5VX71 490 aa21.92■■□□□ 1.1
PHGDH-230ENST00000641927 PPP1R42Q7Z4L9 355 aa21.92■■□□□ 1.1
PHGDH-230ENST00000641927 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
PHGDH-230ENST00000641927 LRRFIP2Q9Y608 721 aaKnown RBP21.92■■□□□ 1.1
PHGDH-230ENST00000641927 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
PHGDH-230ENST00000641927 HDAC5Q9UQL6 1122 aa21.91■■□□□ 1.1
PHGDH-230ENST00000641927 IBTKQ9P2D0 1353 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-230ENST00000641927 UTYO14607 1347 aa21.91■■□□□ 1.1
PHGDH-230ENST00000641927 NFIXQ14938 502 aa21.91■■□□□ 1.1
PHGDH-230ENST00000641927 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-230ENST00000641927 QSER1Q2KHR3 1735 aa21.9■■□□□ 1.1
PHGDH-230ENST00000641927 H7C1W4 665 aa21.9■■□□□ 1.1
PHGDH-230ENST00000641927 NPHP1O15259 732 aa21.9■■□□□ 1.1
PHGDH-230ENST00000641927 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
PHGDH-230ENST00000641927 NLGN1Q8N2Q7 840 aa21.9■■□□□ 1.1
PHGDH-230ENST00000641927 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.1
PHGDH-230ENST00000641927 GTF2E1P29083 439 aaPredicted RBP21.89■■□□□ 1.1
PHGDH-230ENST00000641927 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.1
PHGDH-230ENST00000641927 PPP4R2Q9NY27 417 aa21.89■■□□□ 1.1
PHGDH-230ENST00000641927 PCDHB15Q9Y5E8 787 aa21.89■■□□□ 1.1
PHGDH-230ENST00000641927 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
PHGDH-230ENST00000641927 PDGFDQ9GZP0 370 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-230ENST00000641927 CARMIL3Q8ND23 1372 aa21.88■■□□□ 1.09
PHGDH-230ENST00000641927 R3HDM1Q15032 1099 aaKnown RBP21.88■■□□□ 1.09
PHGDH-230ENST00000641927 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
PHGDH-230ENST00000641927 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
PHGDH-230ENST00000641927 SH3TC1Q8TE82 1336 aa21.87■■□□□ 1.09
PHGDH-230ENST00000641927 NTSR2O95665 410 aa21.87■■□□□ 1.09
PHGDH-230ENST00000641927 CASP7P55210 303 aa21.87■■□□□ 1.09
PHGDH-230ENST00000641927 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
PHGDH-230ENST00000641927 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
PHGDH-230ENST00000641927 TPTE2Q6XPS3 522 aa21.86■■□□□ 1.09
PHGDH-230ENST00000641927 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-230ENST00000641927 TM4SF1P30408 202 aa21.85■■□□□ 1.09
PHGDH-230ENST00000641927 B4GALNT3Q6L9W6 998 aa21.85■■□□□ 1.09
PHGDH-230ENST00000641927 BICC1Q9H694 974 aaKnown RBP21.85■■□□□ 1.09
PHGDH-230ENST00000641927 ERFEQ4G0M1 354 aa21.84■■□□□ 1.09
PHGDH-230ENST00000641927 CEP85Q6P2H3 762 aa21.84■■□□□ 1.09
PHGDH-230ENST00000641927 KAZALD1Q96I82 304 aa21.84■■□□□ 1.09
PHGDH-230ENST00000641927 COL24A1Q17RW2 1714 aa21.84■■□□□ 1.09
PHGDH-230ENST00000641927 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 PSDA5PKW4 1024 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-230ENST00000641927 SERPINB2P05120 415 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 MMP10P09238 476 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 DDR1Q08345 913 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 EPHA10Q5JZY3 1008 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 RPAP2Q8IXW5 612 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-230ENST00000641927 CNBD1Q8NA66 436 aa21.83■■□□□ 1.09
PHGDH-230ENST00000641927 HCLS1P14317 486 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-230ENST00000641927 CCDC24Q8N4L8 307 aa21.82■■□□□ 1.08
PHGDH-230ENST00000641927 CHMP3Q9Y3E7 222 aa21.82■■□□□ 1.08
PHGDH-230ENST00000641927 POLRMTO00411 1230 aaKnown RBP21.82■■□□□ 1.08
PHGDH-230ENST00000641927 ANKRD44Q8N8A2 993 aa21.82■■□□□ 1.08
PHGDH-230ENST00000641927 SLC16A10Q8TF71 515 aa21.82■■□□□ 1.08
PHGDH-230ENST00000641927 PARP3Q9Y6F1 533 aa21.82■■□□□ 1.08
PHGDH-230ENST00000641927 SRGAP3O43295 1099 aa21.81■■□□□ 1.08
PHGDH-230ENST00000641927 HSP90B1P14625 803 aaKnown RBP21.81■■□□□ 1.08
PHGDH-230ENST00000641927 RWDD1Q9H446 243 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-230ENST00000641927 PDE8AO60658 829 aa21.8■■□□□ 1.08
PHGDH-230ENST00000641927 FOXO4P98177 505 aa21.8■■□□□ 1.08
PHGDH-230ENST00000641927 ATP8B2P98198 1209 aa21.8■■□□□ 1.08
PHGDH-230ENST00000641927 LMBR1LQ6UX01 489 aa21.8■■□□□ 1.08
PHGDH-230ENST00000641927 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
PHGDH-230ENST00000641927 PNMA6EA0A0J9YXQ4 647 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 HMMRO75330 724 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 ZBTB7AO95365 584 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 CCDC85AQ96PX6 553 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-230ENST00000641927 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 IGHDP01880 384 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 ST5P78524 1137 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 PRR5LQ6MZQ0 368 aa21.79■■□□□ 1.08
PHGDH-230ENST00000641927 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
PHGDH-230ENST00000641927 CTSWP56202 376 aa21.78■■□□□ 1.08
PHGDH-230ENST00000641927 HDAC1Q13547 482 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-230ENST00000641927 RABL6Q3YEC7 729 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-230ENST00000641927 MTX1Q13505 466 aa21.76■■□□□ 1.07
PHGDH-230ENST00000641927 SLC10A5Q5PT55 438 aa21.75■■□□□ 1.07
PHGDH-230ENST00000641927 NLRP3Q96P20 1036 aa21.75■■□□□ 1.07
PHGDH-230ENST00000641927 DDX60Q8IY21 1712 aaKnown RBP21.75■■□□□ 1.07
PHGDH-230ENST00000641927 CASZ1Q86V15 1759 aa21.75■■□□□ 1.07
PHGDH-230ENST00000641927 TTLL11Q8NHH1 800 aa21.75■■□□□ 1.07
PHGDH-230ENST00000641927 ATF5Q9Y2D1 282 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-230ENST00000641927 LAMB2P55268 1798 aa21.74■■□□□ 1.07
PHGDH-230ENST00000641927 CCDC57Q2TAC2 916 aa21.74■■□□□ 1.07
PHGDH-230ENST00000641927 FAM161AQ3B820 660 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms