RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 GRM8O00222 908 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
PHGDH-220ENST00000641570 GCKRQ14397 625 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
PHGDH-220ENST00000641570 RLBP1P12271 317 aa16.23■□□□□ 0.19
PHGDH-220ENST00000641570 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
PHGDH-220ENST00000641570 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-220ENST00000641570 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
PHGDH-220ENST00000641570 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
PHGDH-220ENST00000641570 ZBTB7AO95365 584 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 GNAI2P04899 355 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 MMP10P09238 476 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 NFIXQ14938 502 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-220ENST00000641570 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
PHGDH-220ENST00000641570 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-220ENST00000641570 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-220ENST00000641570 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
PHGDH-220ENST00000641570 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
PHGDH-220ENST00000641570 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-220ENST00000641570 SERPINB2P05120 415 aa16.2■□□□□ 0.18
PHGDH-220ENST00000641570 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
PHGDH-220ENST00000641570 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
PHGDH-220ENST00000641570 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 HMMRO75330 724 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 MEIS3Q99687 375 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
PHGDH-220ENST00000641570 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
PHGDH-220ENST00000641570 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
PHGDH-220ENST00000641570 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-220ENST00000641570 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
PHGDH-220ENST00000641570 NTSR2O95665 410 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-220ENST00000641570 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-220ENST00000641570 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
PHGDH-220ENST00000641570 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-220ENST00000641570 PDE8AO60658 829 aa16.16■□□□□ 0.18
PHGDH-220ENST00000641570 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
PHGDH-220ENST00000641570 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
PHGDH-220ENST00000641570 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
PHGDH-220ENST00000641570 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
PHGDH-220ENST00000641570 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
PHGDH-220ENST00000641570 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
PHGDH-220ENST00000641570 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
PHGDH-220ENST00000641570 H7C1W4 665 aa16.15■□□□□ 0.18
PHGDH-220ENST00000641570 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-220ENST00000641570 TM4SF1P30408 202 aa16.15■□□□□ 0.18
PHGDH-220ENST00000641570 PDE6BP35913 854 aa16.15■□□□□ 0.18
PHGDH-220ENST00000641570 JARID2Q92833 1246 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-220ENST00000641570 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-220ENST00000641570 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
PHGDH-220ENST00000641570 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
PHGDH-220ENST00000641570 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-220ENST00000641570 DDR1Q08345 913 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 NUP98P52948 1817 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 UTYO14607 1347 aa16.14■□□□□ 0.17
PHGDH-220ENST00000641570 CTSWP56202 376 aa16.13■□□□□ 0.17
PHGDH-220ENST00000641570 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-220ENST00000641570 PDGFDQ9GZP0 370 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-220ENST00000641570 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
PHGDH-220ENST00000641570 ZBTB40Q9NUA8 1239 aa16.13■□□□□ 0.17
PHGDH-220ENST00000641570 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
PHGDH-220ENST00000641570 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
PHGDH-220ENST00000641570 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
PHGDH-220ENST00000641570 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-220ENST00000641570 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-220ENST00000641570 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-220ENST00000641570 ANKRD18BA2A2Z9 1011 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 RBM17Q96I25 401 aaKnown RBP16.11■□□□□ 0.17
PHGDH-220ENST00000641570 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-220ENST00000641570 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
PHGDH-220ENST00000641570 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
PHGDH-220ENST00000641570 H0YIN7 160 aa16.1■□□□□ 0.17
PHGDH-220ENST00000641570 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
PHGDH-220ENST00000641570 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
PHGDH-220ENST00000641570 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
PHGDH-220ENST00000641570 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
PHGDH-220ENST00000641570 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms