RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PLEKHM2Q8IWE5 1019 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 IL1RAPL2Q9NP60 686 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
PHGDH-219ENST00000641513 H7C1W4 665 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 G3BP1Q13283 466 aaKnown RBP eCLIP10.9□□□□□ -0.661e-8■■□□□ 11.6
PHGDH-219ENST00000641513 MTX1Q13505 466 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 HLFQ16534 295 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 GIGYF2Q6Y7W6 1299 aaKnown RBP10.9□□□□□ -0.66
PHGDH-219ENST00000641513 KRT27Q7Z3Y8 459 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 OTUD7AQ8TE49 926 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-219ENST00000641513 ISCA1Q9BUE6 129 aa10.9□□□□□ -0.66
PHGDH-219ENST00000641513 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-219ENST00000641513 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
PHGDH-219ENST00000641513 EIF5P55010 431 aaKnown RBP10.89□□□□□ -0.67
PHGDH-219ENST00000641513 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
PHGDH-219ENST00000641513 EPHA10Q5JZY3 1008 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 SIL1Q9H173 461 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 COL15A1P39059 1388 aa10.89□□□□□ -0.67
PHGDH-219ENST00000641513 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 C4BP0C0L5 1744 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 CASP7P55210 303 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 LMBR1LQ6UX01 489 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
PHGDH-219ENST00000641513 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-219ENST00000641513 SCN7AQ01118 1682 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 LAMB2P55268 1798 aa10.88□□□□□ -0.67
PHGDH-219ENST00000641513 C4AP0C0L4 1744 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 MX1P20591 662 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 CLASRPQ8N2M8 674 aaKnown RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 KLHDC4Q8TBB5 520 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 FAM89AQ96GI7 184 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
PHGDH-219ENST00000641513 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
PHGDH-219ENST00000641513 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 TRIM37O94972 964 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 IFIT2P09913 472 aaKnown RBP10.86□□□□□ -0.67
PHGDH-219ENST00000641513 PDE1AP54750 535 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 FOXO4P98177 505 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 BECN1Q14457 450 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-219ENST00000641513 TSHZ3Q63HK5 1081 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 ZBTB38Q8NAP3 1195 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-219ENST00000641513 UBR3Q6ZT12 1888 aa10.86□□□□□ -0.67
PHGDH-219ENST00000641513 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 GNPATO15228 680 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 CDC45O75419 566 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 SEC24BO95487 1268 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 GSPT1P15170 499 aaKnown RBP10.85□□□□□ -0.67
PHGDH-219ENST00000641513 RXRBP28702 533 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 DEKP35659 375 aaKnown RBP10.85□□□□□ -0.67
PHGDH-219ENST00000641513 MFAP1P55081 439 aaKnown RBP10.85□□□□□ -0.67
PHGDH-219ENST00000641513 TAF7LQ5H9L4 462 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
PHGDH-219ENST00000641513 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-219ENST00000641513 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 RC3H1Q5TC82 1133 aaKnown RBP10.84□□□□□ -0.67
PHGDH-219ENST00000641513 CASC1Q6TDU7 716 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 AACSQ86V21 672 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 ZNF34Q8IZ26 560 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 RILPL2Q969X0 211 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 GPATCH3Q96I76 525 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 AK7Q96M32 723 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 COPRSQ9NQ92 184 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
PHGDH-219ENST00000641513 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
PHGDH-219ENST00000641513 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
PHGDH-219ENST00000641513 IRS4O14654 1257 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-219ENST00000641513 ZPR1O75312 459 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 SASH1O94885 1247 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 SDSP20132 328 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-219ENST00000641513 PTPN12Q05209 780 aaKnown RBP10.83□□□□□ -0.68
PHGDH-219ENST00000641513 SMIM5Q71RC9 77 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 SYNE4Q8N205 404 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 ZNF594Q96JF6 807 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-219ENST00000641513 UTP14AQ9BVJ6 771 aaKnown RBP10.83□□□□□ -0.68
PHGDH-219ENST00000641513 OSBPL3Q9H4L5 887 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 TAF1P21675 1872 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 AOX1Q06278 1338 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 UBN2Q6ZU65 1347 aa10.83□□□□□ -0.68
PHGDH-219ENST00000641513 PHF14O94880 888 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 IFIT5Q13325 482 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms