RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
PHGDH-209ENST00000641074 NUP98P52948 1817 aa22.52■■□□□ 1.2
PHGDH-209ENST00000641074 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
PHGDH-209ENST00000641074 NLRP10Q86W26 655 aa22.51■■□□□ 1.19
PHGDH-209ENST00000641074 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
PHGDH-209ENST00000641074 ANKRD36CQ5JPF3 1778 aa22.51■■□□□ 1.19
PHGDH-209ENST00000641074 PDE1AP54750 535 aa22.5■■□□□ 1.19
PHGDH-209ENST00000641074 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
PHGDH-209ENST00000641074 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
PHGDH-209ENST00000641074 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
PHGDH-209ENST00000641074 CNTNAP4Q9C0A0 1308 aa22.5■■□□□ 1.19
PHGDH-209ENST00000641074 PCCAP05165 728 aaPredicted RBP22.5■■□□□ 1.19
PHGDH-209ENST00000641074 RFX5P48382 616 aaPredicted RBP22.5■■□□□ 1.19
PHGDH-209ENST00000641074 KLHDC4Q8TBB5 520 aa22.5■■□□□ 1.19
PHGDH-209ENST00000641074 CCNL1Q9UK58 526 aaPredicted RBP22.5■■□□□ 1.19
PHGDH-209ENST00000641074 FAM196AQ6ZSG2 479 aa22.49■■□□□ 1.19
PHGDH-209ENST00000641074 ERC1Q8IUD2 1116 aa22.49■■□□□ 1.19
PHGDH-209ENST00000641074 ZBTB38Q8NAP3 1195 aaPredicted RBP22.49■■□□□ 1.19
PHGDH-209ENST00000641074 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
PHGDH-209ENST00000641074 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 MX1P20591 662 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 G3BP1Q13283 466 aaKnown RBP eCLIP22.48■■□□□ 1.199e-7■■■□□ 18.4
PHGDH-209ENST00000641074 ZNF34Q8IZ26 560 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 COPRSQ9NQ92 184 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 LY75O60449 1722 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 SIL1Q9H173 461 aa22.48■■□□□ 1.19
PHGDH-209ENST00000641074 PTPN12Q05209 780 aaKnown RBP22.47■■□□□ 1.19
PHGDH-209ENST00000641074 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
PHGDH-209ENST00000641074 STAP2Q9UGK3 403 aa22.47■■□□□ 1.19
PHGDH-209ENST00000641074 UBN2Q6ZU65 1347 aa22.46■■□□□ 1.19
PHGDH-209ENST00000641074 SASH1O94885 1247 aa22.46■■□□□ 1.19
PHGDH-209ENST00000641074 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
PHGDH-209ENST00000641074 TSHZ3Q63HK5 1081 aa22.46■■□□□ 1.19
PHGDH-209ENST00000641074 CHMP3Q9Y3E7 222 aa22.45■■□□□ 1.19
PHGDH-209ENST00000641074 ANP32AP39687 249 aaKnown RBP22.45■■□□□ 1.18
PHGDH-209ENST00000641074 SYNE4Q8N205 404 aa22.45■■□□□ 1.18
PHGDH-209ENST00000641074 PLA2G12BQ9BX93 195 aa22.45■■□□□ 1.18
PHGDH-209ENST00000641074 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
PHGDH-209ENST00000641074 EP400Q96L91 3159 aa22.44■■□□□ 1.18
PHGDH-209ENST00000641074 CLASRPQ8N2M8 674 aaKnown RBP22.44■■□□□ 1.18
PHGDH-209ENST00000641074 TRMT112Q9UI30 125 aaKnown RBP22.44■■□□□ 1.18
PHGDH-209ENST00000641074 SDSP20132 328 aa22.43■■□□□ 1.18
PHGDH-209ENST00000641074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.43■■□□□ 1.18
PHGDH-209ENST00000641074 RPS6KA4O75676 772 aa22.43■■□□□ 1.18
PHGDH-209ENST00000641074 TRIM37O94972 964 aa22.42■■□□□ 1.18
PHGDH-209ENST00000641074 TBC1D9Q6ZT07 1266 aa22.42■■□□□ 1.18
PHGDH-209ENST00000641074 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
PHGDH-209ENST00000641074 TAF1LQ8IZX4 1826 aa22.42■■□□□ 1.18
PHGDH-209ENST00000641074 AOX1Q06278 1338 aa22.42■■□□□ 1.18
PHGDH-209ENST00000641074 CDC45O75419 566 aa22.41■■□□□ 1.18
PHGDH-209ENST00000641074 SUSD4Q5VX71 490 aa22.41■■□□□ 1.18
PHGDH-209ENST00000641074 GNPATO15228 680 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 CSF1RP07333 972 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 BCORQ6W2J9 1755 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 IRS4O14654 1257 aaPredicted RBP22.4■■□□□ 1.18
PHGDH-209ENST00000641074 RXRBP28702 533 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 LRRC4BQ9NT99 713 aa22.4■■□□□ 1.18
PHGDH-209ENST00000641074 PARP10Q53GL7 1025 aa22.39■■□□□ 1.17
PHGDH-209ENST00000641074 CLEC4GQ6UXB4 293 aa22.39■■□□□ 1.17
PHGDH-209ENST00000641074 AACSQ86V21 672 aa22.39■■□□□ 1.17
PHGDH-209ENST00000641074 FBXO41Q8TF61 875 aa22.39■■□□□ 1.17
PHGDH-209ENST00000641074 EAF2Q96CJ1 260 aaPredicted RBP22.39■■□□□ 1.17
PHGDH-209ENST00000641074 UPF2Q9HAU5 1272 aaKnown RBP22.39■■□□□ 1.17
PHGDH-209ENST00000641074 NIP7Q9Y221 180 aaKnown RBP eCLIP22.39■■□□□ 1.17
PHGDH-209ENST00000641074 USP42Q9H9J4 1324 aaKnown RBP22.39■■□□□ 1.17
PHGDH-209ENST00000641074 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
PHGDH-209ENST00000641074 MFAP1P55081 439 aaKnown RBP22.38■■□□□ 1.17
PHGDH-209ENST00000641074 PI4K2BQ8TCG2 481 aa22.38■■□□□ 1.17
PHGDH-209ENST00000641074 TUBGCP6Q96RT7 1819 aa22.38■■□□□ 1.17
PHGDH-209ENST00000641074 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
PHGDH-209ENST00000641074 ZNF594Q96JF6 807 aaPredicted RBP22.38■■□□□ 1.17
PHGDH-209ENST00000641074 UTP14AQ9BVJ6 771 aaKnown RBP22.38■■□□□ 1.17
PHGDH-209ENST00000641074 RTCBQ9Y3I0 505 aaKnown RBP22.38■■□□□ 1.17
PHGDH-209ENST00000641074 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
PHGDH-209ENST00000641074 TFCP2Q12800 502 aa22.37■■□□□ 1.17
PHGDH-209ENST00000641074 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
PHGDH-209ENST00000641074 CCDC85AQ96PX6 553 aaPredicted RBP22.37■■□□□ 1.17
PHGDH-209ENST00000641074 RGS17Q9UGC6 210 aaPredicted RBP22.37■■□□□ 1.17
PHGDH-209ENST00000641074 FAM177BA6PVY3 158 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 RGL2O15211 777 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 CTSWP56202 376 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 ATG9AQ7Z3C6 839 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 TTLL11Q8NHH1 800 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 TTC41PQ6P2S7 1318 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
PHGDH-209ENST00000641074 PDE8AO60658 829 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 CCDC8Q9H0W5 538 aaPredicted RBP22.35■■□□□ 1.17
PHGDH-209ENST00000641074 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 SCN7AQ01118 1682 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 USPL1Q5W0Q7 1092 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 TBC1D32Q96NH3 1257 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 ECHDC1Q9NTX5 307 aa22.35■■□□□ 1.17
PHGDH-209ENST00000641074 EYA2O00167 538 aa22.34■■□□□ 1.17
PHGDH-209ENST00000641074 NTSR2O95665 410 aa22.34■■□□□ 1.17
PHGDH-209ENST00000641074 IFIT5Q13325 482 aaKnown RBP22.34■■□□□ 1.17
PHGDH-209ENST00000641074 LRRC24Q50LG9 513 aa22.34■■□□□ 1.17
PHGDH-209ENST00000641074 SLC27A3Q5K4L6 730 aa22.34■■□□□ 1.17
PHGDH-209ENST00000641074 ARHGEF1Q92888 912 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms