RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
SCARB2-225ENST00000640900 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
SCARB2-225ENST00000640900 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
SCARB2-225ENST00000640900 H7C1W4 665 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 PHF14O94880 888 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 GCKRQ14397 625 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 CWF19L2Q2TBE0 894 aaKnown RBP11.54□□□□□ -0.56
SCARB2-225ENST00000640900 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
SCARB2-225ENST00000640900 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 MYD88Q99836 296 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 ZBTB40Q9NUA8 1239 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
SCARB2-225ENST00000640900 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-225ENST00000640900 NEXNQ0ZGT2 675 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 AAMPQ13685 434 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 NFIXQ14938 502 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 TBC1D9BQ66K14 1250 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 FTSJ3Q8IY81 847 aaKnown RBP11.53□□□□□ -0.56
SCARB2-225ENST00000640900 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 PDGFDQ9GZP0 370 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-225ENST00000640900 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-225ENST00000640900 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 COG6Q9Y2V7 657 aa11.53□□□□□ -0.56
SCARB2-225ENST00000640900 NRXN2Q9P2S2 1712 aa11.52□□□□□ -0.56
SCARB2-225ENST00000640900 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 GRM8O00222 908 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 SOCS7O14512 581 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 NTSR2O95665 410 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
SCARB2-225ENST00000640900 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-225ENST00000640900 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-225ENST00000640900 DDR1Q08345 913 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-225ENST00000640900 KAZALD1Q96I82 304 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 MEIS3Q99687 375 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCARB2-225ENST00000640900 CDHR2Q9BYE9 1310 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
SCARB2-225ENST00000640900 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
SCARB2-225ENST00000640900 POLRMTO00411 1230 aaKnown RBP11.5□□□□□ -0.57
SCARB2-225ENST00000640900 GPTP24298 496 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 ITPRIPQ8IWB1 547 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 SETDB2Q96T68 719 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
SCARB2-225ENST00000640900 GNAI3P08754 354 aa11.49□□□□□ -0.57
SCARB2-225ENST00000640900 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
SCARB2-225ENST00000640900 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-225ENST00000640900 ARXQ96QS3 562 aa11.49□□□□□ -0.57
SCARB2-225ENST00000640900 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
SCARB2-225ENST00000640900 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
SCARB2-225ENST00000640900 MTX1Q13505 466 aa11.48□□□□□ -0.57
SCARB2-225ENST00000640900 PPP1R42Q7Z4L9 355 aa11.48□□□□□ -0.57
SCARB2-225ENST00000640900 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
SCARB2-225ENST00000640900 LAMB2P55268 1798 aa11.48□□□□□ -0.57
SCARB2-225ENST00000640900 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-225ENST00000640900 CSF1RP07333 972 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 FOXO4P98177 505 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 ANKRD44Q8N8A2 993 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 NYXQ9GZU5 481 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 MTFR1LQ9H019 292 aa11.47□□□□□ -0.57
SCARB2-225ENST00000640900 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-225ENST00000640900 DDX60Q8IY21 1712 aaKnown RBP11.46□□□□□ -0.57
SCARB2-225ENST00000640900 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 GNAI2P04899 355 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 SERPINB2P05120 415 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 MMP10P09238 476 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-225ENST00000640900 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-225ENST00000640900 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 TPTE2Q6XPS3 522 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 TRMT112Q9UI30 125 aaKnown RBP11.46□□□□□ -0.57
SCARB2-225ENST00000640900 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
SCARB2-225ENST00000640900 RTL9Q8NET4 1388 aa11.45□□□□□ -0.58
SCARB2-225ENST00000640900 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-225ENST00000640900 PTGER2P43116 358 aa11.45□□□□□ -0.58
SCARB2-225ENST00000640900 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
SCARB2-225ENST00000640900 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
SCARB2-225ENST00000640900 BICDL1Q6ZP65 573 aa11.45□□□□□ -0.58
SCARB2-225ENST00000640900 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-225ENST00000640900 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
SCARB2-225ENST00000640900 PDE8AO60658 829 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 HSP90B1P14625 803 aaKnown RBP11.44□□□□□ -0.58
SCARB2-225ENST00000640900 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-225ENST00000640900 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms