RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 NLRP10Q86W26 655 aa20.46■□□□□ 0.87
SPIN3-240ENST00000640507 RIC1Q4ADV7 1423 aa20.46■□□□□ 0.87
SPIN3-240ENST00000640507 RNF123Q5XPI4 1314 aa20.46■□□□□ 0.87
SPIN3-240ENST00000640507 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
SPIN3-240ENST00000640507 IL16Q14005 1332 aa20.45■□□□□ 0.86
SPIN3-240ENST00000640507 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
SPIN3-240ENST00000640507 CCDC93Q567U6 631 aa20.44■□□□□ 0.86
SPIN3-240ENST00000640507 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
SPIN3-240ENST00000640507 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
SPIN3-240ENST00000640507 SBF1O95248 1867 aa20.44■□□□□ 0.86
SPIN3-240ENST00000640507 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
SPIN3-240ENST00000640507 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
SPIN3-240ENST00000640507 NMRK2Q9NPI5 230 aa20.44■□□□□ 0.86
SPIN3-240ENST00000640507 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
SPIN3-240ENST00000640507 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
SPIN3-240ENST00000640507 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
SPIN3-240ENST00000640507 TSPYL6Q8N831 410 aa20.43■□□□□ 0.86
SPIN3-240ENST00000640507 WDR63Q8IWG1 891 aa20.42■□□□□ 0.86
SPIN3-240ENST00000640507 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
SPIN3-240ENST00000640507 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
SPIN3-240ENST00000640507 CRAMP1Q96RY5 1269 aa20.42■□□□□ 0.86
SPIN3-240ENST00000640507 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
SPIN3-240ENST00000640507 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
SPIN3-240ENST00000640507 TRMT112Q9UI30 125 aaKnown RBP20.42■□□□□ 0.86
SPIN3-240ENST00000640507 GLTPD2A6NH11 291 aa20.41■□□□□ 0.86
SPIN3-240ENST00000640507 TOMM70O94826 608 aa20.4■□□□□ 0.86
SPIN3-240ENST00000640507 TRIM28Q13263 835 aaKnown RBP20.4■□□□□ 0.86
SPIN3-240ENST00000640507 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
SPIN3-240ENST00000640507 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
SPIN3-240ENST00000640507 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
SPIN3-240ENST00000640507 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
SPIN3-240ENST00000640507 SH3TC1Q8TE82 1336 aa20.4■□□□□ 0.86
SPIN3-240ENST00000640507 TNRC6CQ9HCJ0 1690 aaKnown RBP20.39■□□□□ 0.85
SPIN3-240ENST00000640507 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
SPIN3-240ENST00000640507 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 OLFM4Q6UX06 510 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 SYNE4Q8N205 404 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 RRAGCQ9HB90 399 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
SPIN3-240ENST00000640507 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
SPIN3-240ENST00000640507 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
SPIN3-240ENST00000640507 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
SPIN3-240ENST00000640507 GRIPAP1Q4V328 841 aa20.37■□□□□ 0.85
SPIN3-240ENST00000640507 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
SPIN3-240ENST00000640507 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
SPIN3-240ENST00000640507 PSMD1Q99460 953 aa20.36■□□□□ 0.85
SPIN3-240ENST00000640507 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
SPIN3-240ENST00000640507 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
SPIN3-240ENST00000640507 FAM89AQ96GI7 184 aa20.35■□□□□ 0.85
SPIN3-240ENST00000640507 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
SPIN3-240ENST00000640507 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
SPIN3-240ENST00000640507 BBOX1O75936 387 aa20.34■□□□□ 0.85
SPIN3-240ENST00000640507 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
SPIN3-240ENST00000640507 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
SPIN3-240ENST00000640507 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
SPIN3-240ENST00000640507 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
SPIN3-240ENST00000640507 SNED1Q8TER0 1413 aa20.33■□□□□ 0.85
SPIN3-240ENST00000640507 CACNA1SQ13698 1873 aa20.33■□□□□ 0.85
SPIN3-240ENST00000640507 HSPA6P17066 643 aa20.33■□□□□ 0.84
SPIN3-240ENST00000640507 MYD88Q99836 296 aa20.33■□□□□ 0.84
SPIN3-240ENST00000640507 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.84
SPIN3-240ENST00000640507 ABCC4O15439 1325 aa20.33■□□□□ 0.84
SPIN3-240ENST00000640507 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
SPIN3-240ENST00000640507 VAMP4O75379 141 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 IARSP41252 1262 aaKnown RBP20.32■□□□□ 0.84
SPIN3-240ENST00000640507 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
SPIN3-240ENST00000640507 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
SPIN3-240ENST00000640507 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
SPIN3-240ENST00000640507 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
SPIN3-240ENST00000640507 ZBTB38Q8NAP3 1195 aaPredicted RBP20.31■□□□□ 0.84
SPIN3-240ENST00000640507 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
SPIN3-240ENST00000640507 PI4KAP2A4QPH2 592 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 POTECB2RU33 542 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
SPIN3-240ENST00000640507 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
SPIN3-240ENST00000640507 GRAPQ13588 217 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
SPIN3-240ENST00000640507 SP8Q8IXZ3 490 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 PI4KAP1Q8N8J0 262 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
SPIN3-240ENST00000640507 MAP3K2Q9Y2U5 619 aa20.3■□□□□ 0.84
SPIN3-240ENST00000640507 DDNO94850 711 aaPredicted RBP20.29■□□□□ 0.84
SPIN3-240ENST00000640507 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
SPIN3-240ENST00000640507 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
SPIN3-240ENST00000640507 DICER1Q9UPY3 1922 aaKnown RBP20.29■□□□□ 0.84
SPIN3-240ENST00000640507 FSTL1Q12841 308 aa20.28■□□□□ 0.84
SPIN3-240ENST00000640507 G2E3Q7L622 706 aa20.28■□□□□ 0.84
SPIN3-240ENST00000640507 CWC25Q9NXE8 425 aaPredicted RBP20.28■□□□□ 0.84
SPIN3-240ENST00000640507 TIAM2Q8IVF5 1701 aa20.28■□□□□ 0.84
SPIN3-240ENST00000640507 FZD9O00144 591 aa20.27■□□□□ 0.84
SPIN3-240ENST00000640507 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
SPIN3-240ENST00000640507 TMC4Q7Z404 712 aa20.27■□□□□ 0.84
SPIN3-240ENST00000640507 SLC51AQ86UW1 340 aa20.27■□□□□ 0.84
SPIN3-240ENST00000640507 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms