RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
SPIN3-239ENST00000640463 USP25Q9UHP3 1055 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
SPIN3-239ENST00000640463 ZNF830Q96NB3 372 aaPredicted RBP16.71■□□□□ 0.27
SPIN3-239ENST00000640463 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
SPIN3-239ENST00000640463 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.27
SPIN3-239ENST00000640463 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
SPIN3-239ENST00000640463 UBE2HP62256 183 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 GIMAP6Q6P9H5 292 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
SPIN3-239ENST00000640463 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
SPIN3-239ENST00000640463 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
SPIN3-239ENST00000640463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
SPIN3-239ENST00000640463 MYD88Q99836 296 aa16.69■□□□□ 0.26
SPIN3-239ENST00000640463 SLC27A2O14975 620 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 RBM10P98175 930 aaKnown RBP16.68■□□□□ 0.26
SPIN3-239ENST00000640463 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 XAGE3Q8WTP9 111 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 MAP4K1Q92918 833 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 RRP9O43818 475 aaKnown RBP16.68■□□□□ 0.26
SPIN3-239ENST00000640463 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
SPIN3-239ENST00000640463 KCNB2Q92953 911 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
SPIN3-239ENST00000640463 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
SPIN3-239ENST00000640463 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 CHGBP05060 677 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
SPIN3-239ENST00000640463 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
SPIN3-239ENST00000640463 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
SPIN3-239ENST00000640463 STK3Q13188 491 aa16.66■□□□□ 0.26
SPIN3-239ENST00000640463 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
SPIN3-239ENST00000640463 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
SPIN3-239ENST00000640463 ADCY5O95622 1261 aa16.66■□□□□ 0.26
SPIN3-239ENST00000640463 CDC37L1Q7L3B6 337 aa16.66■□□□□ 0.26
SPIN3-239ENST00000640463 UTYO14607 1347 aa16.66■□□□□ 0.26
SPIN3-239ENST00000640463 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-239ENST00000640463 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
SPIN3-239ENST00000640463 GCKRQ14397 625 aa16.65■□□□□ 0.26
SPIN3-239ENST00000640463 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
SPIN3-239ENST00000640463 MCM5P33992 734 aa16.65■□□□□ 0.26
SPIN3-239ENST00000640463 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
SPIN3-239ENST00000640463 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
SPIN3-239ENST00000640463 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-239ENST00000640463 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
SPIN3-239ENST00000640463 RAPGEF4Q8WZA2 1011 aa16.64■□□□□ 0.25
SPIN3-239ENST00000640463 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-239ENST00000640463 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
SPIN3-239ENST00000640463 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
SPIN3-239ENST00000640463 C17orf53Q8N3J3 647 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-239ENST00000640463 ERBB3P21860 1342 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 UQCRHLA0A096LP55 91 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 HIP1O00291 1037 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 UQCRHP07919 91 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
SPIN3-239ENST00000640463 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 CCDC129Q6ZRS4 1044 aa16.63■□□□□ 0.25
SPIN3-239ENST00000640463 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
SPIN3-239ENST00000640463 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 PSMA5P28066 241 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 TFCP2Q12800 502 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 FAM13BQ9NYF5 915 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 SLIT3O75094 1523 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 CAMK4Q16566 473 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
SPIN3-239ENST00000640463 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 C5P01031 1676 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
SPIN3-239ENST00000640463 AP5Z1O43299 807 aa16.61■□□□□ 0.25
SPIN3-239ENST00000640463 RPS6KB1P23443 525 aa16.61■□□□□ 0.25
SPIN3-239ENST00000640463 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
SPIN3-239ENST00000640463 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
SPIN3-239ENST00000640463 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
SPIN3-239ENST00000640463 KDM6AO15550 1401 aaPredicted RBP16.61■□□□□ 0.25
SPIN3-239ENST00000640463 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
SPIN3-239ENST00000640463 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms