RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 USP16Q9Y5T5 823 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
RTTN-216ENST00000640376 DCCP43146 1447 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 LARGE1O95461 756 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 MBD3O95983 291 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 CLCN1P35523 988 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
RTTN-216ENST00000640376 METTL22Q9BUU2 404 aaPredicted RBP10.8□□□□□ -0.68
RTTN-216ENST00000640376 CCDC171Q6TFL3 1326 aa10.8□□□□□ -0.68
RTTN-216ENST00000640376 NMIQ13287 307 aaPredicted RBP10.79□□□□□ -0.68
RTTN-216ENST00000640376 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 DTNBO60941 627 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 SNRPA1P09661 255 aaKnown RBP10.79□□□□□ -0.68
RTTN-216ENST00000640376 KCNJ4P48050 445 aa10.79□□□□□ -0.68
RTTN-216ENST00000640376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.681e-6■■■■□ 21.1
RTTN-216ENST00000640376 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 FMNL2Q96PY5 1086 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 PPP1R9BQ96SB3 815 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 RBM8AQ9Y5S9 174 aaKnown RBP10.78□□□□□ -0.68
RTTN-216ENST00000640376 A0A0D9SFI3 127 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 LRSAM1Q6UWE0 723 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 LRP10Q7Z4F1 713 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 CCDC83Q8IWF9 413 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 PDRG1Q9NUG6 133 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
RTTN-216ENST00000640376 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 PTCD1O75127 700 aaKnown RBP10.78□□□□□ -0.68
RTTN-216ENST00000640376 SMC3Q9UQE7 1217 aa10.78□□□□□ -0.68
RTTN-216ENST00000640376 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.78□□□□□ -0.68
RTTN-216ENST00000640376 GADD45BO75293 160 aaPredicted RBP10.77□□□□□ -0.69
RTTN-216ENST00000640376 CABP4P57796 275 aa10.77□□□□□ -0.69
RTTN-216ENST00000640376 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
RTTN-216ENST00000640376 CYP46A1Q9Y6A2 500 aa10.77□□□□□ -0.69
RTTN-216ENST00000640376 HIP1O00291 1037 aa10.77□□□□□ -0.69
RTTN-216ENST00000640376 CREB3L3Q68CJ9 461 aa10.77□□□□□ -0.69
RTTN-216ENST00000640376 EDC3Q96F86 508 aaKnown RBP10.77□□□□□ -0.69
RTTN-216ENST00000640376 NUP188Q5SRE5 1749 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 STX6O43752 255 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 ZSCAN22P10073 491 aaPredicted RBP10.76□□□□□ -0.69
RTTN-216ENST00000640376 ZKSCAN1P17029 563 aaPredicted RBP10.76□□□□□ -0.69
RTTN-216ENST00000640376 SYT1P21579 422 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 VPS53Q5VIR6 699 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 CNPY2Q9Y2B0 182 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 SPATA31A3Q5VYP0 1347 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 TJP1Q07157 1748 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
RTTN-216ENST00000640376 GJB2P29033 226 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 COL9A3Q14050 684 aaPredicted RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 ZNF589Q86UQ0 364 aaPredicted RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 RNF214Q8ND24 703 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 A0A087WZG4 1122 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 SLC27A2O14975 620 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 PTPN12Q05209 780 aaKnown RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 TFCP2Q12800 502 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 KCNB2Q92953 911 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 SYAP1Q96A49 352 aaPredicted RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 TM6SF1Q9BZW5 370 aa10.75□□□□□ -0.69
RTTN-216ENST00000640376 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
RTTN-216ENST00000640376 RFX5P48382 616 aaPredicted RBP10.74□□□□□ -0.69
RTTN-216ENST00000640376 ST3GAL1Q11201 340 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 TNNI3KQ59H18 835 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 TCEANC2Q96MN5 208 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 COPRSQ9NQ92 184 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 FPGT-TNNI3KV9GXZ4 949 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 CPDO75976 1380 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 FIBPO43427 364 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 F13A1P00488 732 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 ME3Q16798 604 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 CHMP3Q9Y3E7 222 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 TAF6LQ9Y6J9 622 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
RTTN-216ENST00000640376 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
RTTN-216ENST00000640376 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
RTTN-216ENST00000640376 STRCQ7RTU9 1775 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 SHANK3Q9BYB0 1731 aa10.74□□□□□ -0.69
RTTN-216ENST00000640376 PLBD2Q8NHP8 589 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 ZSCAN31Q96LW9 406 aaPredicted RBP10.73□□□□□ -0.69
RTTN-216ENST00000640376 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 PAPPAQ13219 1627 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 VPS37CA5D8V6 355 aaPredicted RBP10.73□□□□□ -0.69
RTTN-216ENST00000640376 HSPA2P54652 639 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 RABL6Q3YEC7 729 aaPredicted RBP10.73□□□□□ -0.69
RTTN-216ENST00000640376 TMEM87AQ8NBN3 555 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
RTTN-216ENST00000640376 PRDM11Q9NQV5 511 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms