RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	PALD1	Q9ULE6	856 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	NRXN1	Q9ULB1	1477 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	SETBP1	Q9Y6X0	1596 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	GADD45B	O75293	160 aa	Predicted RBP	10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	TPM3	P06753	285 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	PHKG2	P15735	406 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	FAM184A	Q8NB25	1140 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	TMX3	Q96JJ7	454 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	TECPR2	O15040	1411 aa		10.38	□□□□□ -0.75
CNTN2-231	ENST00000640352	CEP85	Q6P2H3	762 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	CNTROB	Q8N137	903 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	MARCH10	Q8NA82	808 aa	Predicted RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	PPP1R9B	Q96SB3	815 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	TRIM34	Q9BYJ4	488 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	NCOA3	Q9Y6Q9	1424 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	WDR33	Q9C0J8	1336 aa	Known RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	CCAR2	Q8N163	923 aa	Known RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	CCDC112	Q8NEF3	446 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	USP16	Q9Y5T5	823 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZNF142	P52746	1687 aa	Predicted RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	SPATA31A6	Q5VVP1	1343 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	QRICH2	Q9H0J4	1663 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	STARD3NL	O95772	234 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	GNL2	Q13823	731 aa	Known RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	CLASRP	Q8N2M8	674 aa	Known RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	FBXW7	Q969H0	707 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	SRCIN1	Q9C0H9	1055 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	PCDH11X	Q9BZA7	1347 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352	PCDH11Y	Q9BZA8	1340 aa		10.37	□□□□□ -0.75
CNTN2-231	ENST00000640352		H3BQV1	296 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	LETM1	O95202	739 aa	Predicted RBP	10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	IFFO2	Q5TF58	517 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	LRSAM1	Q6UWE0	723 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	HOMER1	Q86YM7	354 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	DCAF5	Q96JK2	942 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	RNF20	Q5VTR2	975 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	BANK1	Q8NDB2	785 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	FMNL2	Q96PY5	1086 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	NOL7	Q9UMY1	257 aa	Known RBP	10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	PIGB	Q92521	554 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	TOMM22	Q9NS69	142 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZPR1	O75312	459 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	RFC4	P35249	363 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	HS1BP3	Q53T59	392 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	NUTM1	Q86Y26	1132 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	TTC12	Q9H892	705 aa	Predicted RBP	10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	CHPF2	Q9P2E5	772 aa		10.36	□□□□□ -0.75
CNTN2-231	ENST00000640352	CPA1	P15085	419 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	NEXN	Q0ZGT2	675 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	TEX35	Q5T0J7	233 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	ANKRD44	Q8N8A2	993 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	CCDC94	Q9BW85	323 aa	Predicted RBP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	CPSF1	Q10570	1443 aa	Known RBP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	BAG6	P46379	1132 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	ABCC4	O15439	1325 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	ADCY5	O95622	1261 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	CCDC192	P0DO97	292 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	GTF2A1	P52655	376 aa	Predicted RBP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	TPM4	P67936	248 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	PRIMPOL	Q96LW4	560 aa		10.35	□□□□□ -0.75
CNTN2-231	ENST00000640352	MX1	P20591	662 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZNF790	Q6PG37	636 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	PSMD1	Q99460	953 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZBTB7A	O95365	584 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZNF445	P59923	1031 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	COPS6	Q7L5N1	327 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	ZBTB9	Q96C00	473 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	PHAX	Q9H814	394 aa	Known RBP	10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	PTPRC	P08575	1304 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	PDE1A	P54750	535 aa		10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.34	□□□□□ -0.75
CNTN2-231	ENST00000640352	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	SPATA31A1	Q5TZJ5	1347 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	HCLS1	P14317	486 aa	Predicted RBP	10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	KIF6	Q6ZMV9	814 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	TEX2	Q8IWB9	1127 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	SF3A1	Q15459	793 aa	Known RBP	10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	VPS72	Q15906	364 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	FAM196A	Q6ZSG2	479 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	DEF6	Q9H4E7	631 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	SET	Q01105	290 aa	Predicted RBP	10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	XAGE3	Q8WTP9	111 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	C16orf45	Q96MC5	204 aa	Predicted RBP	10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	MYD88	Q99836	296 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	SIL1	Q9H173	461 aa		10.33	□□□□□ -0.76
CNTN2-231	ENST00000640352	DDX58	O95786	925 aa	Known RBP	10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	PNMA6E	A0A0J9YXQ4	647 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	GPS2	Q13227	327 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	R3HDM1	Q15032	1099 aa	Known RBP	10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	SLC52A2	Q9HAB3	445 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	LOC102724428	A0A0B4J2F2	783 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	PI4KAP2	A4QPH2	592 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	SRGAP3	O43295	1099 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms