RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 LRRC9Q6ZRR7 1453 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 DCDC2BA2VCK2 349 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 TXLNAP40222 546 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 FOXK2Q01167 660 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 TNP2Q05952 138 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 TBCELQ5QJ74 424 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 FIGNL1Q6PIW4 674 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 NLRP8Q86W28 1048 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
ATM-229ENST00000639953 GPATCH8Q9UKJ3 1502 aaKnown RBP9.15□□□□□ -0.95
ATM-229ENST00000639953 ADGRL1O94910 1474 aa9.15□□□□□ -0.95
ATM-229ENST00000639953 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 NEURL1BA8MQ27 555 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
ATM-229ENST00000639953 RAD21O60216 631 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 IGHA1P01876 353 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 MAPTP10636 758 aaKnown RBP9.14□□□□□ -0.95
ATM-229ENST00000639953 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
ATM-229ENST00000639953 PSME1Q06323 249 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 MAP3K1Q13233 1512 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 DENND4BO75064 1496 aaPredicted RBP9.14□□□□□ -0.95
ATM-229ENST00000639953 NCOA2Q15596 1464 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
ATM-229ENST00000639953 PHLDB1Q86UU1 1377 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 SAMD9LQ8IVG5 1584 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 BACH1O14867 736 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
ATM-229ENST00000639953 LZTS3O60299 673 aaPredicted RBP9.13□□□□□ -0.95
ATM-229ENST00000639953 CD33P20138 364 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 ZDHHC1Q8WTX9 485 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 BTBD6Q96KE9 485 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
ATM-229ENST00000639953 KLF15Q9UIH9 416 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
ATM-229ENST00000639953 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
ATM-229ENST00000639953 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
ATM-229ENST00000639953 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
ATM-229ENST00000639953 AMPD1P23109 780 aa9.12□□□□□ -0.95
ATM-229ENST00000639953 ZDHHC3Q9NYG2 299 aa9.12□□□□□ -0.95
ATM-229ENST00000639953 ITSN2Q9NZM3 1697 aa9.12□□□□□ -0.95
ATM-229ENST00000639953 ABCC1P33527 1531 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 ZNF644Q9H582 1327 aaPredicted RBP9.11□□□□□ -0.95
ATM-229ENST00000639953 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 EPXP11678 715 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 COL8A1P27658 744 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 BICDL1Q6ZP65 573 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 SUV39H2Q9H5I1 410 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 STRN4Q9NRL3 753 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 KIAA1024Q9UPX6 916 aa9.11□□□□□ -0.95
ATM-229ENST00000639953 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 MSTNO14793 375 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 ARAFP10398 606 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 NOS2P35228 1153 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 HNRNPMP52272 730 aaKnown RBP eCLIP9.1□□□□□ -0.956e-7■■■□□ 18.1
ATM-229ENST00000639953 EPHA4P54764 986 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 SH3PXD2AQ5TCZ1 1133 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 AFAP1Q8N556 730 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 CFDP1Q9UEE9 299 aaPredicted RBP9.1□□□□□ -0.95
ATM-229ENST00000639953 GJA3Q9Y6H8 435 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 POGZQ7Z3K3 1410 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 TRAPPC8Q9Y2L5 1435 aa9.1□□□□□ -0.95
ATM-229ENST00000639953 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
ATM-229ENST00000639953 FLIIQ13045 1269 aa9.09□□□□□ -0.95
ATM-229ENST00000639953 SLC9A9Q8IVB4 645 aa9.09□□□□□ -0.95
ATM-229ENST00000639953 C7orf43Q8WVR3 580 aa9.09□□□□□ -0.95
ATM-229ENST00000639953 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
ATM-229ENST00000639953 SIGLEC1Q9BZZ2 1709 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 PCBP4P57723 403 aaKnown RBP9.08□□□□□ -0.96
ATM-229ENST00000639953 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 TEAD4Q15561 434 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 ZMYM4Q5VZL5 1548 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
ATM-229ENST00000639953 KDM5CP41229 1560 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 ARHGEF40Q8TER5 1519 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 CLDN10P78369 228 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 FAM182BQ5T319 152 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 LRRC69Q6ZNQ3 347 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 FCHSD1Q86WN1 690 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 CAMSAP2Q08AD1 1489 aa9.07□□□□□ -0.96
ATM-229ENST00000639953 ZFYVE16Q7Z3T8 1539 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 PROCP04070 461 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 CLUAP1Q96AJ1 413 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms