RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 BRD1O95696 1058 aa10.4□□□□□ -0.74
NECAP1-218ENST00000639595 TM6SF1Q9BZW5 370 aa10.4□□□□□ -0.74
NECAP1-218ENST00000639595 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
NECAP1-218ENST00000639595 CCDC8Q9H0W5 538 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-218ENST00000639595 ZNF335Q9H4Z2 1342 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-218ENST00000639595 A0A087WZG4 1122 aa10.39□□□□□ -0.75
NECAP1-218ENST00000639595 PIP4K2AP48426 406 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-218ENST00000639595 UBE3BQ7Z3V4 1068 aa10.39□□□□□ -0.75
NECAP1-218ENST00000639595 STRCQ7RTU9 1775 aa10.39□□□□□ -0.75
NECAP1-218ENST00000639595 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 PTH1RQ03431 593 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 NECTIN1Q15223 517 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 KLHDC4Q8TBB5 520 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 MAP4K1Q92918 833 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 SIL1Q9H173 461 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
NECAP1-218ENST00000639595 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
NECAP1-218ENST00000639595 TNS2Q63HR2 1409 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 ATP5JP18859 108 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 GRPEL1Q9HAV7 217 aa10.38□□□□□ -0.75
NECAP1-218ENST00000639595 ATP5J2-PTCD1G3V325 749 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 PTCD1O75127 700 aaKnown RBP10.37□□□□□ -0.75
NECAP1-218ENST00000639595 FOXO4P98177 505 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 GAS2L3Q86XJ1 694 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 ANO8Q9HCE9 1232 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-218ENST00000639595 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 KCPQ6ZWJ8 1503 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 TNNI3KQ59H18 835 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 LIMCH1Q9UPQ0 1083 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 FPGT-TNNI3KV9GXZ4 949 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 CCDC171Q6TFL3 1326 aa10.37□□□□□ -0.75
NECAP1-218ENST00000639595 VPS53Q5VIR6 699 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 TTLL7Q6ZT98 887 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 RUFY3Q7L099 469 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 CCDC191Q8NCU4 936 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 BOLA2Q9H3K6 86 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 DBNLQ9UJU6 430 aaKnown RBP10.36□□□□□ -0.75
NECAP1-218ENST00000639595 A1BGP04217 495 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 AK2P54819 239 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 TFCP2Q12800 502 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 NMIQ13287 307 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-218ENST00000639595 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-218ENST00000639595 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
NECAP1-218ENST00000639595 CWC25Q9NXE8 425 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-218ENST00000639595 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 EVA1CP58658 441 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 ZNF445P59923 1031 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 AK9Q5TCS8 1911 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 LMBR1LQ6UX01 489 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
NECAP1-218ENST00000639595 GPR108Q9NPR9 543 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 UBR2Q8IWV8 1755 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 RFX7Q2KHR2 1363 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 JCADQ9P266 1359 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 MED23Q9ULK4 1368 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
NECAP1-218ENST00000639595 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-218ENST00000639595 TRIM28Q13263 835 aaKnown RBP10.35□□□□□ -0.75
NECAP1-218ENST00000639595 TSGA10IPQ3SY00 556 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
NECAP1-218ENST00000639595 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 PANK2Q9BZ23 570 aa10.35□□□□□ -0.75
NECAP1-218ENST00000639595 CASTP20810 708 aaKnown RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ADCK5Q3MIX3 580 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 CREB3L3Q68CJ9 461 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 RBM8AQ9Y5S9 174 aaKnown RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 CYP46A1Q9Y6A2 500 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 A0A0D9SFI3 127 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 NOL8Q76FK4 1167 aaKnown RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ATG9AQ7Z3C6 839 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 FAM43AQ8N2R8 423 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ZSCAN31Q96LW9 406 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 HAUS7Q99871 368 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 FSD1Q9BTV5 496 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ALDH8A1Q9H2A2 487 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-218ENST00000639595 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 ARFGEF2Q9Y6D5 1785 aa10.34□□□□□ -0.75
NECAP1-218ENST00000639595 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
NECAP1-218ENST00000639595 ISCA1Q9BUE6 129 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 SH2B1Q9NRF2 756 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-218ENST00000639595 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 RPAP1Q9BWH6 1393 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-218ENST00000639595 SLC27A2O14975 620 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 PSMA5P28066 241 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 TMOD3Q9NYL9 352 aa10.33□□□□□ -0.76
NECAP1-218ENST00000639595 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 TAF5LO75529 589 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 CIAO1O76071 339 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-218ENST00000639595 RNF20Q5VTR2 975 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 DBNDD2Q9BQY9 259 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms