RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
SCARB2-214ENST00000638843 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
SCARB2-214ENST00000638843 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
SCARB2-214ENST00000638843 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-214ENST00000638843 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCARB2-214ENST00000638843 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
SCARB2-214ENST00000638843 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-214ENST00000638843 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
SCARB2-214ENST00000638843 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-214ENST00000638843 SRGNP10124 158 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 GTF2E1P29083 439 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-214ENST00000638843 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
SCARB2-214ENST00000638843 NTSR2O95665 410 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 TWISTNBQ3B726 338 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-214ENST00000638843 MIER1Q8N108 512 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 NYXQ9GZU5 481 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
SCARB2-214ENST00000638843 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 BCORQ6W2J9 1755 aa12.29□□□□□ -0.44
SCARB2-214ENST00000638843 N4BP2Q86UW6 1770 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-214ENST00000638843 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
SCARB2-214ENST00000638843 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
SCARB2-214ENST00000638843 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
SCARB2-214ENST00000638843 STYK1Q6J9G0 422 aa12.28□□□□□ -0.44
SCARB2-214ENST00000638843 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
SCARB2-214ENST00000638843 MASTLQ96GX5 879 aa12.28□□□□□ -0.44
SCARB2-214ENST00000638843 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
SCARB2-214ENST00000638843 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
SCARB2-214ENST00000638843 VAMP4O75379 141 aa12.27□□□□□ -0.44
SCARB2-214ENST00000638843 NPR1P16066 1061 aa12.27□□□□□ -0.44
SCARB2-214ENST00000638843 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.44
SCARB2-214ENST00000638843 SYNE4Q8N205 404 aa12.27□□□□□ -0.44
SCARB2-214ENST00000638843 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.44
SCARB2-214ENST00000638843 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-214ENST00000638843 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 C21orf2O43822 256 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
SCARB2-214ENST00000638843 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 SLC10A5Q5PT55 438 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 G2E3Q7L622 706 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
SCARB2-214ENST00000638843 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
SCARB2-214ENST00000638843 NFKBIEO00221 500 aa12.25□□□□□ -0.45
SCARB2-214ENST00000638843 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-214ENST00000638843 PRELPP51888 382 aa12.25□□□□□ -0.45
SCARB2-214ENST00000638843 TRIM28Q13263 835 aaKnown RBP12.25□□□□□ -0.45
SCARB2-214ENST00000638843 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
SCARB2-214ENST00000638843 C7orf43Q8WVR3 580 aa12.25□□□□□ -0.45
SCARB2-214ENST00000638843 ADCY9O60503 1353 aa12.24□□□□□ -0.45
SCARB2-214ENST00000638843 PI4KAP2A4QPH2 592 aa12.24□□□□□ -0.45
SCARB2-214ENST00000638843 RASSF7Q02833 373 aa12.24□□□□□ -0.45
SCARB2-214ENST00000638843 PI4KAP1Q8N8J0 262 aa12.24□□□□□ -0.45
SCARB2-214ENST00000638843 HOXA10P31260 410 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-214ENST00000638843 OLFM4Q6UX06 510 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 KSR2Q6VAB6 950 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 NLRP3Q96P20 1036 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 MYD88Q99836 296 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 MAP3K2Q9Y2U5 619 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 ANKRD31Q8N7Z5 1873 aa12.23□□□□□ -0.45
SCARB2-214ENST00000638843 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 ALDH1B1P30837 517 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 METTL22Q9BUU2 404 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 RNF181Q9P0P0 153 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 E9PSI1 815 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 FLIIQ13045 1269 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
SCARB2-214ENST00000638843 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
SCARB2-214ENST00000638843 IGKV5-2P06315 115 aa12.21□□□□□ -0.46
SCARB2-214ENST00000638843 LMNB1P20700 586 aa12.21□□□□□ -0.46
SCARB2-214ENST00000638843 CLCN6P51797 869 aa12.21□□□□□ -0.46
SCARB2-214ENST00000638843 RBM17Q96I25 401 aaKnown RBP12.21□□□□□ -0.46
SCARB2-214ENST00000638843 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-214ENST00000638843 NUP98P52948 1817 aa12.2□□□□□ -0.46
SCARB2-214ENST00000638843 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
SCARB2-214ENST00000638843 JARID2Q92833 1246 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-214ENST00000638843 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
SCARB2-214ENST00000638843 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-214ENST00000638843 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms