RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 CLEC17AQ6ZS10 378 aa12.56□□□□□ -0.4
PAX6-236ENST00000638685 C8orf37Q96NL8 207 aa12.56□□□□□ -0.4
PAX6-236ENST00000638685 AOX1Q06278 1338 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 GOLGA6L22H0YM25 854 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 CWC22Q9HCG8 908 aaKnown RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 BCL9LQ86UU0 1499 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 H7C1W4 665 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 FOXO4P98177 505 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
PAX6-236ENST00000638685 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
PAX6-236ENST00000638685 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
PAX6-236ENST00000638685 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 KCNQ2O43526 872 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 CHMLP26374 656 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 NUCB2P80303 420 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 HLFQ16534 295 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
PAX6-236ENST00000638685 MCCP23508 829 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
PAX6-236ENST00000638685 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
PAX6-236ENST00000638685 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
PAX6-236ENST00000638685 SYNE4Q8N205 404 aa12.53□□□□□ -0.4
PAX6-236ENST00000638685 ARXQ96QS3 562 aa12.53□□□□□ -0.4
PAX6-236ENST00000638685 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
PAX6-236ENST00000638685 HDAC5Q9UQL6 1122 aa12.53□□□□□ -0.4
PAX6-236ENST00000638685 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.4
PAX6-236ENST00000638685 MCM2P49736 904 aa12.52□□□□□ -0.4
PAX6-236ENST00000638685 AACSQ86V21 672 aa12.52□□□□□ -0.4
PAX6-236ENST00000638685 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.4
PAX6-236ENST00000638685 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.4
PAX6-236ENST00000638685 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
PAX6-236ENST00000638685 NUP98P52948 1817 aa12.52□□□□□ -0.4
PAX6-236ENST00000638685 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.4
PAX6-236ENST00000638685 STARD3NLO95772 234 aa12.52□□□□□ -0.41
PAX6-236ENST00000638685 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.41
PAX6-236ENST00000638685 PTF1AQ7RTS3 328 aa12.52□□□□□ -0.41
PAX6-236ENST00000638685 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
PAX6-236ENST00000638685 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
PAX6-236ENST00000638685 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
PAX6-236ENST00000638685 COL15A1P39059 1388 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 MRE11P49959 708 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
PAX6-236ENST00000638685 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 ANAPC15P60006 121 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
PAX6-236ENST00000638685 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
PAX6-236ENST00000638685 GPTP24298 496 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
PAX6-236ENST00000638685 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 JCADQ9P266 1359 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
PAX6-236ENST00000638685 TFCP2Q12800 502 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 ITPK1Q13572 414 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 MAP3K15Q6ZN16 1313 aa12.5□□□□□ -0.41
PAX6-236ENST00000638685 KCNQ4P56696 695 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
PAX6-236ENST00000638685 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 PALD1Q9ULE6 856 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
PAX6-236ENST00000638685 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
PAX6-236ENST00000638685 FAM43AQ8N2R8 423 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
PAX6-236ENST00000638685 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 SSFA2P28290 1259 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 SIK1P57059 783 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 VPS72Q15906 364 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 IL17RAQ96F46 866 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 PUS3Q9BZE2 481 aaKnown RBP12.48□□□□□ -0.41
PAX6-236ENST00000638685 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 ANO2Q9NQ90 1003 aa12.48□□□□□ -0.41
PAX6-236ENST00000638685 BAG4O95429 457 aaKnown RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 CYP2E1P05181 493 aaPredicted RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 NEK4P51957 841 aa12.47□□□□□ -0.41
PAX6-236ENST00000638685 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
PAX6-236ENST00000638685 TNNI3KQ59H18 835 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms