RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
GFAP-227ENST00000638400 C1QTNF8P60827 252 aa16.19■□□□□ 0.18
GFAP-227ENST00000638400 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
GFAP-227ENST00000638400 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
GFAP-227ENST00000638400 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
GFAP-227ENST00000638400 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
GFAP-227ENST00000638400 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
GFAP-227ENST00000638400 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
GFAP-227ENST00000638400 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
GFAP-227ENST00000638400 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
GFAP-227ENST00000638400 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
GFAP-227ENST00000638400 PRELPP51888 382 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 C7orf43Q8WVR3 580 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
GFAP-227ENST00000638400 NUP98P52948 1817 aa16.17■□□□□ 0.18
GFAP-227ENST00000638400 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
GFAP-227ENST00000638400 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
GFAP-227ENST00000638400 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
GFAP-227ENST00000638400 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
GFAP-227ENST00000638400 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
GFAP-227ENST00000638400 KIF3CO14782 793 aa16.14■□□□□ 0.17
GFAP-227ENST00000638400 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
GFAP-227ENST00000638400 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
GFAP-227ENST00000638400 ISCA1Q9BUE6 129 aa16.14■□□□□ 0.17
GFAP-227ENST00000638400 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
GFAP-227ENST00000638400 ARFGEF2Q9Y6D5 1785 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 NEFLP07196 543 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
GFAP-227ENST00000638400 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 CRAMP1Q96RY5 1269 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 NMRK2Q9NPI5 230 aa16.13■□□□□ 0.17
GFAP-227ENST00000638400 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
GFAP-227ENST00000638400 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
GFAP-227ENST00000638400 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
GFAP-227ENST00000638400 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
GFAP-227ENST00000638400 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
GFAP-227ENST00000638400 ANKRD36CQ5JPF3 1778 aa16.11■□□□□ 0.17
GFAP-227ENST00000638400 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
GFAP-227ENST00000638400 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
GFAP-227ENST00000638400 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
GFAP-227ENST00000638400 PPEF1O14829 653 aaPredicted RBP16.1■□□□□ 0.17
GFAP-227ENST00000638400 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
GFAP-227ENST00000638400 MYH16Q9H6N6 1097 aa16.1■□□□□ 0.17
GFAP-227ENST00000638400 SNED1Q8TER0 1413 aa16.1■□□□□ 0.17
GFAP-227ENST00000638400 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 PSMD1Q99460 953 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 MYD88Q99836 296 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
GFAP-227ENST00000638400 ABCC4O15439 1325 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
GFAP-227ENST00000638400 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.17
GFAP-227ENST00000638400 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
GFAP-227ENST00000638400 TOMM70O94826 608 aa16.08■□□□□ 0.16
GFAP-227ENST00000638400 ERICH6BQ5W0A0 696 aa16.08■□□□□ 0.16
GFAP-227ENST00000638400 DPY19L2Q6NUT2 758 aa16.08■□□□□ 0.16
GFAP-227ENST00000638400 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
GFAP-227ENST00000638400 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
GFAP-227ENST00000638400 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
GFAP-227ENST00000638400 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
GFAP-227ENST00000638400 SBF1O95248 1867 aa16.08■□□□□ 0.16
GFAP-227ENST00000638400 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
GFAP-227ENST00000638400 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
GFAP-227ENST00000638400 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
GFAP-227ENST00000638400 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
GFAP-227ENST00000638400 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
GFAP-227ENST00000638400 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
GFAP-227ENST00000638400 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
GFAP-227ENST00000638400 BBOX1O75936 387 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
GFAP-227ENST00000638400 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
GFAP-227ENST00000638400 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
GFAP-227ENST00000638400 CWC25Q9NXE8 425 aaPredicted RBP16.06■□□□□ 0.16
GFAP-227ENST00000638400 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
GFAP-227ENST00000638400 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
GFAP-227ENST00000638400 VAMP4O75379 141 aa16.05■□□□□ 0.16
GFAP-227ENST00000638400 GRAPQ13588 217 aa16.05■□□□□ 0.16
GFAP-227ENST00000638400 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
GFAP-227ENST00000638400 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
GFAP-227ENST00000638400 RBM46Q8TBY0 533 aaKnown RBP16.05■□□□□ 0.16
GFAP-227ENST00000638400 GRAPLQ8TC17 118 aaPredicted RBP16.05■□□□□ 0.16
GFAP-227ENST00000638400 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms