RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 GNPATO15228 680 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
LINC00598-216ENST00000638163 BCORQ6W2J9 1755 aa12.79□□□□□ -0.36
LINC00598-216ENST00000638163 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
LINC00598-216ENST00000638163 TAF1LQ8IZX4 1826 aa12.79□□□□□ -0.36
LINC00598-216ENST00000638163 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
LINC00598-216ENST00000638163 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
LINC00598-216ENST00000638163 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
LINC00598-216ENST00000638163 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
LINC00598-216ENST00000638163 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
LINC00598-216ENST00000638163 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 RFC4P35249 363 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 CASP7P55210 303 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
LINC00598-216ENST00000638163 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
LINC00598-216ENST00000638163 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.37
LINC00598-216ENST00000638163 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
LINC00598-216ENST00000638163 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.37
LINC00598-216ENST00000638163 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
LINC00598-216ENST00000638163 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
LINC00598-216ENST00000638163 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
LINC00598-216ENST00000638163 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
LINC00598-216ENST00000638163 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
LINC00598-216ENST00000638163 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00598-216ENST00000638163 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
LINC00598-216ENST00000638163 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
LINC00598-216ENST00000638163 PDE8AO60658 829 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 AOX1Q06278 1338 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00598-216ENST00000638163 HLFQ16534 295 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 RIC1Q4ADV7 1423 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
LINC00598-216ENST00000638163 NUP98P52948 1817 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
LINC00598-216ENST00000638163 CIAO1O76071 339 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
LINC00598-216ENST00000638163 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
LINC00598-216ENST00000638163 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
LINC00598-216ENST00000638163 CSF1RP07333 972 aa12.73□□□□□ -0.37
LINC00598-216ENST00000638163 CTSWP56202 376 aa12.73□□□□□ -0.37
LINC00598-216ENST00000638163 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
LINC00598-216ENST00000638163 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
LINC00598-216ENST00000638163 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
LINC00598-216ENST00000638163 KAZALD1Q96I82 304 aa12.73□□□□□ -0.37
LINC00598-216ENST00000638163 UBN2Q6ZU65 1347 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
LINC00598-216ENST00000638163 NTSR2O95665 410 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 GPTP24298 496 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 IL15P40933 162 aaPredicted RBP12.72□□□□□ -0.37
LINC00598-216ENST00000638163 FOXO4P98177 505 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 IFIT5Q13325 482 aaKnown RBP12.72□□□□□ -0.37
LINC00598-216ENST00000638163 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
LINC00598-216ENST00000638163 LAMB2P55268 1798 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 ANKRD18BA2A2Z9 1011 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
LINC00598-216ENST00000638163 RGS3P49796 1198 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 SLC10A5Q5PT55 438 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 PROM2Q8N271 834 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 LNPKQ9C0E8 428 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
LINC00598-216ENST00000638163 TTC41PQ6P2S7 1318 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 NBPF5PQ86XG9 351 aaPredicted RBP12.7□□□□□ -0.38
LINC00598-216ENST00000638163 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 FAM89AQ96GI7 184 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 CDC5LQ99459 802 aaKnown RBP12.7□□□□□ -0.38
LINC00598-216ENST00000638163 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 C4AP0C0L4 1744 aa12.7□□□□□ -0.38
LINC00598-216ENST00000638163 ERC2O15083 957 aa12.69□□□□□ -0.38
LINC00598-216ENST00000638163 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
LINC00598-216ENST00000638163 SUSD4Q5VX71 490 aa12.69□□□□□ -0.38
LINC00598-216ENST00000638163 TTLL11Q8NHH1 800 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms