RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 YTHDC2Q9H6S0 1430 aaKnown RBP14.12□□□□□ -0.15
CAPN3-221ENST00000638141 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
CAPN3-221ENST00000638141 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
CAPN3-221ENST00000638141 OAS2P29728 719 aaKnown RBP14.11□□□□□ -0.15
CAPN3-221ENST00000638141 GSDMDP57764 484 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 CCDC158Q5M9N0 1113 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-221ENST00000638141 RPAINQ86UA6 219 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 CARD10Q9BWT7 1032 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 PIK3C2BO00750 1634 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-221ENST00000638141 MNS1Q8NEH6 495 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 PPM1EQ8WY54 764 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 TTC14Q96N46 770 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 MBIPQ9NS73 344 aa14.11□□□□□ -0.15
CAPN3-221ENST00000638141 POLR3GO15318 223 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-221ENST00000638141 CHMLP26374 656 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 HSPA4P34932 840 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 HSPA2P54652 639 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 TSPYL6Q8N831 410 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 TNMDQ9H2S6 317 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 CEP170BQ9Y4F5 1589 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-221ENST00000638141 PHLPP2Q6ZVD8 1323 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 CASTP20810 708 aaKnown RBP14.1□□□□□ -0.15
CAPN3-221ENST00000638141 ZNF165P49910 485 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 SNW1Q13573 536 aaKnown RBP14.1□□□□□ -0.15
CAPN3-221ENST00000638141 PACS2Q86VP3 889 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 MSL3Q8N5Y2 521 aaKnown RBP14.1□□□□□ -0.15
CAPN3-221ENST00000638141 CLSTN2Q9H4D0 955 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
CAPN3-221ENST00000638141 LMTK3Q96Q04 1460 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 DNM1Q05193 864 aaKnown RBP14.09□□□□□ -0.15
CAPN3-221ENST00000638141 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
CAPN3-221ENST00000638141 UBXN4Q92575 508 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 MED4Q9NPJ6 270 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 STAP2Q9UGK3 403 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 MYO5BQ9ULV0 1848 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 EFCAB8A8MWE9 144 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 PRKAR2BP31323 418 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 OSBPL5Q9H0X9 879 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-221ENST00000638141 LIMCH1Q9UPQ0 1083 aa14.09□□□□□ -0.15
CAPN3-221ENST00000638141 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.15
CAPN3-221ENST00000638141 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.15
CAPN3-221ENST00000638141 SETD1AO15047 1707 aaKnown RBP14.08□□□□□ -0.16
CAPN3-221ENST00000638141 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
CAPN3-221ENST00000638141 IMPACTQ9P2X3 320 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 MSH6P52701 1360 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 TADA3O75528 432 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 KRT85P78386 507 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 MCTP2Q6DN12 878 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-221ENST00000638141 ANO2Q9NQ90 1003 aa14.08□□□□□ -0.16
CAPN3-221ENST00000638141 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
CAPN3-221ENST00000638141 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 NPHP3Q7Z494 1330 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 CORO7P57737 925 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 IQCB1Q15051 598 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 LEKR1Q6ZMV7 388 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 NOL8Q76FK4 1167 aaKnown RBP14.07□□□□□ -0.16
CAPN3-221ENST00000638141 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
CAPN3-221ENST00000638141 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
CAPN3-221ENST00000638141 FYB1O15117 783 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 CCP110O43303 1012 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 SATB1Q01826 763 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 CXorf56Q9H5V9 222 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
CAPN3-221ENST00000638141 ADAM21Q9UKJ8 722 aa14.07□□□□□ -0.16
CAPN3-221ENST00000638141 TTC41PQ6P2S7 1318 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 LIG1P18858 919 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
CAPN3-221ENST00000638141 MMS22LQ6ZRQ5 1243 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 TTC6Q86TZ1 520 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 NEXMIFQ5QGS0 1516 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
CAPN3-221ENST00000638141 PPP1R13BQ96KQ4 1090 aa14.05□□□□□ -0.16
CAPN3-221ENST00000638141 DRC1Q96MC2 740 aa14.05□□□□□ -0.16
CAPN3-221ENST00000638141 EIF3CLB5ME19 914 aaKnown RBP14.05□□□□□ -0.16
CAPN3-221ENST00000638141 GOLGA6L19H0YKK7 550 aa14.05□□□□□ -0.16
CAPN3-221ENST00000638141 SASH3O75995 380 aa14.05□□□□□ -0.16
CAPN3-221ENST00000638141 GPR161Q8N6U8 529 aaKnown RBP14.05□□□□□ -0.16
CAPN3-221ENST00000638141 EIF3CQ99613 913 aaKnown RBP14.05□□□□□ -0.16
CAPN3-221ENST00000638141 SCAND2PQ9GZW5 306 aaPredicted RBP14.05□□□□□ -0.16
CAPN3-221ENST00000638141 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
CAPN3-221ENST00000638141 DNAI1Q9UI46 699 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms