RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PAPPAQ13219 1627 aa26.02■■□□□ 1.76
CLN6-224ENST00000638076 GOLGA6L3A6NEY3 463 aa26.02■■□□□ 1.76
CLN6-224ENST00000638076 RASEFQ8IZ41 740 aa26.01■■□□□ 1.75
CLN6-224ENST00000638076 IL27Q8NEV9 243 aa26.01■■□□□ 1.75
CLN6-224ENST00000638076 BOLA2Q9H3K6 86 aa26.01■■□□□ 1.75
CLN6-224ENST00000638076 TNS2Q63HR2 1409 aa26■■□□□ 1.75
CLN6-224ENST00000638076 FSD2A1L4K1 749 aa26■■□□□ 1.75
CLN6-224ENST00000638076 ZDHHC9Q9Y397 364 aa26■■□□□ 1.75
CLN6-224ENST00000638076 PTH1RQ03431 593 aa25.99■■□□□ 1.75
CLN6-224ENST00000638076 ARXQ96QS3 562 aa25.99■■□□□ 1.75
CLN6-224ENST00000638076 H7C1W4 665 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 TFCP2Q12800 502 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 INTS4Q96HW7 963 aaKnown RBP25.98■■□□□ 1.75
CLN6-224ENST00000638076 BTG4Q9NY30 223 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 TMOD3Q9NYL9 352 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 HIP1O00291 1037 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 MCTP1Q6DN14 999 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 LMBR1LQ6UX01 489 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 ZBTB3Q9H5J0 574 aa25.98■■□□□ 1.75
CLN6-224ENST00000638076 CWC25Q9NXE8 425 aaPredicted RBP25.98■■□□□ 1.75
CLN6-224ENST00000638076 TNNI3KQ59H18 835 aa25.97■■□□□ 1.75
CLN6-224ENST00000638076 FAM227BQ96M60 508 aa25.97■■□□□ 1.75
CLN6-224ENST00000638076 FPGT-TNNI3KV9GXZ4 949 aa25.97■■□□□ 1.75
CLN6-224ENST00000638076 FOXO4P98177 505 aa25.96■■□□□ 1.75
CLN6-224ENST00000638076 NMIQ13287 307 aaPredicted RBP25.96■■□□□ 1.75
CLN6-224ENST00000638076 FSD1Q9BTV5 496 aa25.96■■□□□ 1.75
CLN6-224ENST00000638076 CHMP3Q9Y3E7 222 aa25.96■■□□□ 1.75
CLN6-224ENST00000638076 NUP188Q5SRE5 1749 aa25.95■■□□□ 1.75
CLN6-224ENST00000638076 TOGARAM1Q9Y4F4 1720 aa25.95■■□□□ 1.75
CLN6-224ENST00000638076 DBNLQ9UJU6 430 aaKnown RBP25.95■■□□□ 1.74
CLN6-224ENST00000638076 TTC14Q96N46 770 aa25.94■■□□□ 1.74
CLN6-224ENST00000638076 CCDC171Q6TFL3 1326 aa25.94■■□□□ 1.74
CLN6-224ENST00000638076 PRPF40BQ6NWY9 871 aaKnown RBP25.93■■□□□ 1.74
CLN6-224ENST00000638076 CCDC191Q8NCU4 936 aa25.93■■□□□ 1.74
CLN6-224ENST00000638076 DDX49Q9Y6V7 483 aaKnown RBP25.93■■□□□ 1.74
CLN6-224ENST00000638076 XRCC6P12956 609 aaKnown RBP eCLIP25.92■■□□□ 1.74
CLN6-224ENST00000638076 ATP5JP18859 108 aa25.92■■□□□ 1.74
CLN6-224ENST00000638076 CASTP20810 708 aaKnown RBP25.92■■□□□ 1.74
CLN6-224ENST00000638076 KLHL40Q2TBA0 621 aa25.92■■□□□ 1.74
CLN6-224ENST00000638076 ASAP1Q9ULH1 1129 aa25.92■■□□□ 1.74
CLN6-224ENST00000638076 AK2P54819 239 aa25.91■■□□□ 1.74
CLN6-224ENST00000638076 PIGBQ92521 554 aa25.91■■□□□ 1.74
CLN6-224ENST00000638076 A0A0D9SFI3 127 aa25.91■■□□□ 1.74
CLN6-224ENST00000638076 NECTIN1Q15223 517 aa25.91■■□□□ 1.74
CLN6-224ENST00000638076 FOXD4L5Q5VV16 416 aaPredicted RBP25.91■■□□□ 1.74
CLN6-224ENST00000638076 FOXD4L4Q8WXT5 416 aaPredicted RBP25.91■■□□□ 1.74
CLN6-224ENST00000638076 KCNB2Q92953 911 aa25.9■■□□□ 1.74
CLN6-224ENST00000638076 EDC3Q96F86 508 aaKnown RBP25.9■■□□□ 1.74
CLN6-224ENST00000638076 SNRKQ9NRH2 765 aa25.9■■□□□ 1.74
CLN6-224ENST00000638076 LMBRD1Q9NUN5 540 aa25.9■■□□□ 1.74
CLN6-224ENST00000638076 BRD1O95696 1058 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 CPA1P15085 419 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 ZNF330Q9Y3S2 320 aaPredicted RBP25.89■■□□□ 1.74
CLN6-224ENST00000638076 RBM8AQ9Y5S9 174 aaKnown RBP25.89■■□□□ 1.74
CLN6-224ENST00000638076 TJP1Q07157 1748 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 ADCK5Q3MIX3 580 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 MAP4K1Q92918 833 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 DBNDD2Q9BQY9 259 aa25.89■■□□□ 1.74
CLN6-224ENST00000638076 JAKMIP1Q96N16 626 aaKnown RBP25.88■■□□□ 1.73
CLN6-224ENST00000638076 RUFY3Q7L099 469 aa25.88■■□□□ 1.73
CLN6-224ENST00000638076 DNAJC10Q8IXB1 793 aa25.88■■□□□ 1.73
CLN6-224ENST00000638076 KCNJ4P48050 445 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 LARP6Q9BRS8 491 aaKnown RBP25.87■■□□□ 1.73
CLN6-224ENST00000638076 ISY1Q9ULR0 285 aaKnown RBP25.87■■□□□ 1.73
CLN6-224ENST00000638076 LIMCH1Q9UPQ0 1083 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 ZKSCAN1P17029 563 aaPredicted RBP25.87■■□□□ 1.73
CLN6-224ENST00000638076 MRE11P49959 708 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 ATG9AQ7Z3C6 839 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 VSIG10Q8N0Z9 540 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 TEX13AQ9BXU3 409 aaPredicted RBP25.87■■□□□ 1.73
CLN6-224ENST00000638076 ATG3Q9NT62 314 aa25.87■■□□□ 1.73
CLN6-224ENST00000638076 CREB3L3Q68CJ9 461 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 CHAMP1Q96JM3 812 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 TM6SF1Q9BZW5 370 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 NDUFB9Q9Y6M9 179 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 ISCA1Q9BUE6 129 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 ZSWIM6Q9HCJ5 1215 aa25.86■■□□□ 1.73
CLN6-224ENST00000638076 MED23Q9ULK4 1368 aa25.85■■□□□ 1.73
CLN6-224ENST00000638076 PRPF40AO75400 957 aaKnown RBP25.85■■□□□ 1.73
CLN6-224ENST00000638076 TCIRG1Q13488 830 aa25.85■■□□□ 1.73
CLN6-224ENST00000638076 DNAJC2Q99543 621 aaKnown RBP25.85■■□□□ 1.73
CLN6-224ENST00000638076 GRPEL1Q9HAV7 217 aa25.85■■□□□ 1.73
CLN6-224ENST00000638076 PDRG1Q9NUG6 133 aa25.85■■□□□ 1.73
CLN6-224ENST00000638076 CYP46A1Q9Y6A2 500 aa25.85■■□□□ 1.73
CLN6-224ENST00000638076 DISP2A7MBM2 1401 aa25.84■■□□□ 1.73
CLN6-224ENST00000638076 VPS53Q5VIR6 699 aa25.84■■□□□ 1.73
CLN6-224ENST00000638076 ZNF589Q86UQ0 364 aaPredicted RBP25.84■■□□□ 1.73
CLN6-224ENST00000638076 GAS2L3Q86XJ1 694 aa25.83■■□□□ 1.73
CLN6-224ENST00000638076 COL14A1Q05707 1796 aaKnown RBP25.83■■□□□ 1.73
CLN6-224ENST00000638076 IL15P40933 162 aaPredicted RBP25.83■■□□□ 1.73
CLN6-224ENST00000638076 ZNF594Q96JF6 807 aaPredicted RBP25.83■■□□□ 1.73
CLN6-224ENST00000638076 HAUS7Q99871 368 aa25.83■■□□□ 1.73
CLN6-224ENST00000638076 PANK2Q9BZ23 570 aa25.83■■□□□ 1.73
CLN6-224ENST00000638076 SLC27A2O14975 620 aa25.82■■□□□ 1.72
CLN6-224ENST00000638076 STARD3NLO95772 234 aa25.82■■□□□ 1.72
CLN6-224ENST00000638076 KIF6Q6ZMV9 814 aa25.82■■□□□ 1.72
CLN6-224ENST00000638076 NEUROD6Q96NK8 337 aa25.82■■□□□ 1.72
CLN6-224ENST00000638076 CCDC9Q9Y3X0 531 aaKnown RBP25.82■■□□□ 1.72
CLN6-224ENST00000638076 NCLP19338 710 aaKnown RBP25.82■■□□□ 1.72
CLN6-224ENST00000638076 LRRC24Q50LG9 513 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms