RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CLASRPQ8N2M8 674 aaKnown RBP26.59■■□□□ 1.85
CHRNA7-228ENST00000637519 COL15A1P39059 1388 aa26.59■■□□□ 1.85
CHRNA7-228ENST00000637519 ERC1Q8IUD2 1116 aa26.58■■□□□ 1.85
CHRNA7-228ENST00000637519 GPTP24298 496 aa26.58■■□□□ 1.84
CHRNA7-228ENST00000637519 RBM25P49756 843 aaKnown RBP26.58■■□□□ 1.84
CHRNA7-228ENST00000637519 PTPN12Q05209 780 aaKnown RBP26.58■■□□□ 1.84
CHRNA7-228ENST00000637519 AACSQ86V21 672 aa26.58■■□□□ 1.84
CHRNA7-228ENST00000637519 TBC1D2BQ9UPU7 963 aa26.58■■□□□ 1.84
CHRNA7-228ENST00000637519 AOX1Q06278 1338 aa26.57■■□□□ 1.84
CHRNA7-228ENST00000637519 TLR7Q9NYK1 1049 aaKnown RBP26.56■■□□□ 1.84
CHRNA7-228ENST00000637519 EAF2Q96CJ1 260 aaPredicted RBP26.56■■□□□ 1.84
CHRNA7-228ENST00000637519 CRKLP46109 303 aaKnown RBP26.55■■□□□ 1.84
CHRNA7-228ENST00000637519 INTS5Q6P9B9 1019 aaKnown RBP26.55■■□□□ 1.84
CHRNA7-228ENST00000637519 AFF2P51816 1311 aa26.55■■□□□ 1.84
CHRNA7-228ENST00000637519 KCNQ4P56696 695 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 CASC1Q6TDU7 716 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 GIGYF2Q6Y7W6 1299 aaKnown RBP26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 SYNE4Q8N205 404 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 FAM89AQ96GI7 184 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 ANP32EQ9BTT0 268 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 CCDC8Q9H0W5 538 aaPredicted RBP26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 COPRSQ9NQ92 184 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 IFIT2P09913 472 aaKnown RBP26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 DZIP3Q86Y13 1208 aaKnown RBP26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 TBC1D2Q9BYX2 928 aa26.54■■□□□ 1.84
CHRNA7-228ENST00000637519 IL6STP40189 918 aaPredicted RBP26.53■■□□□ 1.84
CHRNA7-228ENST00000637519 KIF2CQ99661 725 aa26.53■■□□□ 1.84
CHRNA7-228ENST00000637519 CCDC87Q9NVE4 849 aa26.53■■□□□ 1.84
CHRNA7-228ENST00000637519 THSD7AQ9UPZ6 1657 aa26.52■■□□□ 1.84
CHRNA7-228ENST00000637519 CCDC85AQ96PX6 553 aaPredicted RBP26.51■■□□□ 1.83
CHRNA7-228ENST00000637519 USP42Q9H9J4 1324 aaKnown RBP26.51■■□□□ 1.83
CHRNA7-228ENST00000637519 TFCP2Q12800 502 aa26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 ZNF594Q96JF6 807 aaPredicted RBP26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 CHMLP26374 656 aa26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 EIF5P55010 431 aaKnown RBP26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 TRIM28Q13263 835 aaKnown RBP26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 BECN1Q14457 450 aa26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 NLRP10Q86W26 655 aa26.5■■□□□ 1.83
CHRNA7-228ENST00000637519 GJD4Q96KN9 370 aaPredicted RBP26.49■■□□□ 1.83
CHRNA7-228ENST00000637519 USP26Q9BXU7 913 aa26.49■■□□□ 1.83
CHRNA7-228ENST00000637519 ECHDC1Q9NTX5 307 aa26.49■■□□□ 1.83
CHRNA7-228ENST00000637519 TTC41PQ6P2S7 1318 aa26.49■■□□□ 1.83
CHRNA7-228ENST00000637519 IL25Q9H293 177 aa26.48■■□□□ 1.83
CHRNA7-228ENST00000637519 MYH14Q7Z406 1995 aaKnown RBP26.48■■□□□ 1.83
CHRNA7-228ENST00000637519 ERC2O15083 957 aa26.48■■□□□ 1.83
CHRNA7-228ENST00000637519 PCCAP05165 728 aaPredicted RBP26.48■■□□□ 1.83
CHRNA7-228ENST00000637519 UBN2Q6ZU65 1347 aa26.47■■□□□ 1.83
CHRNA7-228ENST00000637519 ESYT1Q9BSJ8 1104 aa26.47■■□□□ 1.83
CHRNA7-228ENST00000637519 GLRX3O76003 335 aaKnown RBP26.46■■□□□ 1.83
CHRNA7-228ENST00000637519 ZBTB38Q8NAP3 1195 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-228ENST00000637519 SMARCC1Q92922 1105 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-228ENST00000637519 ANKRD36CQ5JPF3 1778 aa26.46■■□□□ 1.83
CHRNA7-228ENST00000637519 LINC00116Q8NCU8 138 aa26.45■■□□□ 1.83
CHRNA7-228ENST00000637519 NUP98P52948 1817 aa26.45■■□□□ 1.83
CHRNA7-228ENST00000637519 GPATCH3Q96I76 525 aa26.45■■□□□ 1.82
CHRNA7-228ENST00000637519 RREB1Q92766 1687 aa26.45■■□□□ 1.82
CHRNA7-228ENST00000637519 LRRC24Q50LG9 513 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 HSP90AB3PQ58FF7 597 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 TNNI3KQ59H18 835 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 SMIM5Q71RC9 77 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 SPRYD3Q8NCJ5 442 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 FPGT-TNNI3KV9GXZ4 949 aa26.44■■□□□ 1.82
CHRNA7-228ENST00000637519 CICQ96RK0 1608 aaPredicted RBP26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 ERVV-1B6SEH8 477 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 REC8O95072 547 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 ATG9AQ7Z3C6 839 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 CNTROBQ8N137 903 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 DBNLQ9UJU6 430 aaKnown RBP26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 AK9Q5TCS8 1911 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 NBR1Q14596 966 aa26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 PUS3Q9BZE2 481 aaKnown RBP26.43■■□□□ 1.82
CHRNA7-228ENST00000637519 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 TRMT112Q9UI30 125 aaKnown RBP26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 ATRNO75882 1429 aa26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 FAM177BA6PVY3 158 aa26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 CD2BP2O95400 341 aaKnown RBP26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 SLKQ9H2G2 1235 aaPredicted RBP26.42■■□□□ 1.82
CHRNA7-228ENST00000637519 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
CHRNA7-228ENST00000637519 BOLA2Q9H3K6 86 aa26.41■■□□□ 1.82
CHRNA7-228ENST00000637519 BTAF1O14981 1849 aa26.4■■□□□ 1.82
CHRNA7-228ENST00000637519 ZNF34Q8IZ26 560 aa26.4■■□□□ 1.82
CHRNA7-228ENST00000637519 DBNDD2Q9BQY9 259 aa26.4■■□□□ 1.82
CHRNA7-228ENST00000637519 ANO2Q9NQ90 1003 aa26.4■■□□□ 1.82
CHRNA7-228ENST00000637519 SEPT12Q8IYM1 358 aa26.39■■□□□ 1.82
CHRNA7-228ENST00000637519 CCDC57Q2TAC2 916 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 PLA2G12BQ9BX93 195 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 TRPC5Q9UL62 973 aaPredicted RBP26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 NHSQ6T4R5 1651 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 EP400Q96L91 3159 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 EYA2O00167 538 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 IRS4O14654 1257 aaPredicted RBP26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 HSCBQ8IWL3 235 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 NDUFB9Q9Y6M9 179 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 CDHR2Q9BYE9 1310 aa26.38■■□□□ 1.81
CHRNA7-228ENST00000637519 EIF5BO60841 1220 aaKnown RBP26.37■■□□□ 1.81
CHRNA7-228ENST00000637519 SUSD4Q5VX71 490 aa26.37■■□□□ 1.81
CHRNA7-228ENST00000637519 EDC3Q96F86 508 aaKnown RBP26.37■■□□□ 1.81
CHRNA7-228ENST00000637519 CWC27Q6UX04 472 aaKnown RBP26.37■■□□□ 1.81
CHRNA7-228ENST00000637519 GREM2Q9H772 168 aa26.37■■□□□ 1.81
CHRNA7-228ENST00000637519 CSF1RP07333 972 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms