RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	ZBTB3	Q9H5J0	574 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CCT4	P50991	539 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	IQCG	Q9H095	443 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	AFAP1	Q8N556	730 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SNX16	P57768	344 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ZBTB16	Q05516	673 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	RUSC2	Q8N2Y8	1516 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CGN	Q9P2M7	1197 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	CCDC194	A0A1B0GVG4	234 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	STARD3NL	O95772	234 aa		18.78	■□□□□ 0.6
CACNA1A-238	ENST00000637276	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	18.77	■□□□□ 0.6
CACNA1A-238	ENST00000637276	TSPY2	A6NKD2	308 aa		18.77	■□□□□ 0.6
CACNA1A-238	ENST00000637276	PTPN14	Q15678	1187 aa		18.77	■□□□□ 0.6
CACNA1A-238	ENST00000637276	FGFR1OP	O95684	399 aa	Known RBP	18.77	■□□□□ 0.6
CACNA1A-238	ENST00000637276	HYPK	Q9NX55	129 aa		18.77	■□□□□ 0.6
CACNA1A-238	ENST00000637276	ATP5J2-PTCD1	G3V325	749 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	MAEA	Q7L5Y9	396 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CAPZA3	Q96KX2	299 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CTCFL	Q8NI51	663 aa	Predicted RBP	18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	HEATR3	Q7Z4Q2	680 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CLIP2	Q9UDT6	1046 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	FAM184B	Q9ULE4	1060 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	C4orf50	Q6ZRC1	276 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	OSCAR	Q8IYS5	282 aa		18.76	■□□□□ 0.59
CACNA1A-238	ENST00000637276	TRIM6	Q9C030	488 aa	Predicted RBP	18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	EHMT1	Q9H9B1	1298 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	RFC4	P35249	363 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	SEPT6	Q14141	434 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	FERMT1	Q9BQL6	677 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CUL4B	Q13620	913 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CCDC114	Q96M63	670 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	TMEM57	Q8N5G2	664 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	RBM27	Q9P2N5	1060 aa	Known RBP	18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	PPP1R9B	Q96SB3	815 aa		18.75	■□□□□ 0.59
CACNA1A-238	ENST00000637276	PAFAH1B1	P43034	410 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	FRMD4B	Q9Y2L6	1034 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CALML4	Q96GE6	196 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	C8orf76	Q96K31	380 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	SBNO2	Q9Y2G9	1366 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ZNF213	O14771	459 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	MICU3	Q86XE3	530 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	SLC26A6	Q9BXS9	759 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	LRRC2	Q9BYS8	371 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ZNF652	Q9Y2D9	606 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ABL1	P00519	1130 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	C6orf163	Q5TEZ5	329 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	GTF3C6	Q969F1	213 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	MROH2B	Q7Z745	1585 aa		18.74	■□□□□ 0.59
CACNA1A-238	ENST00000637276	TTC30A	Q86WT1	665 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	STX6	O43752	255 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CABP5	Q9NP86	173 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	WASF1	Q92558	559 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	TAOK3	Q9H2K8	898 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	STX8	Q9UNK0	236 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	NACAD	O15069	1562 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ARHGAP5	Q13017	1502 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276		F6X3S4	739 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	TSTA3	Q13630	321 aa	Predicted RBP	18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CCT6B	Q92526	530 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ZNF830	Q96NB3	372 aa	Predicted RBP	18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	KAT14	Q9H8E8	782 aa		18.73	■□□□□ 0.59
CACNA1A-238	ENST00000637276	MVP	Q14764	893 aa	Known RBP	18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	RSPH3	Q86UC2	560 aa		18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	USO1	O60763	962 aa	Known RBP	18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ZYX	Q15942	572 aa	Known RBP	18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	KCNK9	Q9NPC2	374 aa		18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	IFRD2	Q12894	506 aa	Predicted RBP	18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ANAPC4	Q9UJX5	808 aa		18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CATIP	Q7Z7H3	387 aa		18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CWC25	Q9NXE8	425 aa	Predicted RBP	18.72	■□□□□ 0.59
CACNA1A-238	ENST00000637276	ACRBP	Q8NEB7	543 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	RABEP2	Q9H5N1	569 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	LIMCH1	Q9UPQ0	1083 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	KRT5	P13647	590 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	KIAA0753	Q2KHM9	967 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	NACA2	Q9H009	215 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	CEP83	Q9Y592	693 aa		18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	BZW2	Q9Y6E2	419 aa	Known RBP	18.71	■□□□□ 0.59
CACNA1A-238	ENST00000637276	RNASE9	P60153	205 aa	Known RBP	18.71	■□□□□ 0.58
CACNA1A-238	ENST00000637276	KMT5B	Q4FZB7	885 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	ZNF287	Q9HBT7	754 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SLC5A1	P13866	664 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	NOD1	Q9Y239	953 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	GOLIM4	O00461	696 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	IQCA1	Q86XH1	822 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	USP25	Q9UHP3	1055 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	ANKFY1	Q9P2R3	1169 aa		18.7	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TBC1D5	Q92609	795 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CTNNA3	Q9UI47	895 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TMEM67	Q5HYA8	995 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CFAP157	Q5JU67	520 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	CCDC170	Q8IYT3	715 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	PPFIA1	Q13136	1202 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	AFG3L2	Q9Y4W6	797 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	TBCA	O75347	108 aa	Known RBP	18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	KIF4A	O95239	1232 aa		18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	SFPQ	P23246	707 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	IFIT5	Q13325	482 aa	Known RBP	18.69	■□□□□ 0.58
CACNA1A-238	ENST00000637276	FAM13A	O94988	1023 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms