RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-222	ENST00000637226	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	3.79	□□□□□ -1.8
GABRB3-222	ENST00000637226	ALG2	Q9H553	416 aa		3.79	□□□□□ -1.8
GABRB3-222	ENST00000637226	EFCC1	Q9HA90	598 aa		3.79	□□□□□ -1.8
GABRB3-222	ENST00000637226	SLC6A14	Q9UN76	642 aa		3.79	□□□□□ -1.8
GABRB3-222	ENST00000637226	USP17L5	A8MUK1	530 aa		3.78	□□□□□ -1.8
GABRB3-222	ENST00000637226	ZBTB7B	O15156	539 aa	Predicted RBP	3.78	□□□□□ -1.8
GABRB3-222	ENST00000637226	HIRA	P54198	1017 aa	Predicted RBP	3.78	□□□□□ -1.8
GABRB3-222	ENST00000637226	HIF1A	Q16665	826 aa		3.78	□□□□□ -1.8
GABRB3-222	ENST00000637226	FMR1NB	Q8N0W7	255 aa	Predicted RBP	3.78	□□□□□ -1.8
GABRB3-222	ENST00000637226	PPP1R12B	O60237	982 aa	Predicted RBP	3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	AFF1	P51825	1210 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	BTLA	Q7Z6A9	289 aa		3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	ALDH16A1	Q8IZ83	802 aa		3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	DNAJB12	Q9NXW2	375 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	RBM19	Q9Y4C8	960 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	3.77	□□□□□ -1.81
GABRB3-222	ENST00000637226	BTBD11	A6QL63	1104 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226		M0R2N6	131 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	IREB2	P48200	963 aa	Known RBP	3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	CCIN	Q13939	588 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	MCM6	Q14566	821 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	PCSK7	Q16549	785 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	MSL1	Q68DK7	614 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	POTEA	Q6S8J7	498 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	WFDC12	Q8WWY7	111 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	NGLY1	Q96IV0	654 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	SSBP4	Q9BWG4	385 aa	Predicted RBP	3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	GSX2	Q9BZM3	304 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	RNF112	Q9ULX5	631 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	KIAA1024	Q9UPX6	916 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	COG6	Q9Y2V7	657 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	ATAD2	Q6PL18	1390 aa		3.76	□□□□□ -1.81
GABRB3-222	ENST00000637226	USP17L3	A6NCW0	530 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	USP17L4	A6NCW7	530 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	PALM3	A6NDB9	673 aa	Predicted RBP	3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	CPB1	P15086	417 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	NFKB1	P19838	968 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	CLDN10	P78369	228 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	USP17L2	Q6R6M4	530 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	USP17L1	Q7RTZ2	530 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	FAM35A	Q86V20	835 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	FBXO11	Q86XK2	927 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	LARGE2	Q8N3Y3	721 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	OGFOD1	Q8N543	542 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	DTWD1	Q8N5C7	304 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	TSEN2	Q8NCE0	465 aa	Known RBP	3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	CHMP7	Q8WUX9	453 aa	Predicted RBP	3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	GOLGA2P5	Q9HBQ8	144 aa		3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	MKRN1	Q9UHC7	482 aa	Known RBP	3.75	□□□□□ -1.81
GABRB3-222	ENST00000637226	EPB42	P16452	691 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	NOS3	P29474	1203 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	ELMSAN1	Q6PJG2	1045 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	IGF2-AS	Q6U949	168 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	ILDR2	Q71H61	639 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	WFDC8	Q8IUA0	241 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	PLEKHM2	Q8IWE5	1019 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	STAG2	Q8N3U4	1231 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	GAS2L2	Q8NHY3	880 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	SCG3	Q8WXD2	468 aa	Known RBP	3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	C2orf49	Q9BVC5	232 aa	Predicted RBP	3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	PCMTD2	Q9NV79	361 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	FRRS1L	Q9P0K9	344 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	NAGPA	Q9UK23	515 aa		3.74	□□□□□ -1.81
GABRB3-222	ENST00000637226	TGFBR3L	H3BV60	316 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	C21orf2	O43822	256 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	RAD21	O60216	631 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	IER5	Q5VY09	327 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	MCTP1	Q6DN14	999 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	ZNF594	Q96JF6	807 aa	Predicted RBP	3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	MEGF10	Q96KG7	1140 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	LPIN3	Q9BQK8	851 aa		3.73	□□□□□ -1.81
GABRB3-222	ENST00000637226	PAX4	O43316	350 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	ATP9B	O43861	1147 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	RTN1	Q16799	776 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	PERM1	Q5SV97	790 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	HDGFL1	Q5TGJ6	251 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	PRR23C	Q6ZRP0	262 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	KRT25	Q7Z3Z0	450 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	SLC51A	Q86UW1	340 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	SIX5	Q8N196	739 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	HINFP	Q9BQA5	517 aa		3.72	□□□□□ -1.81
GABRB3-222	ENST00000637226	ZBTB42	B2RXF5	422 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	MAP3K6	O95382	1288 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	RASA1	P20936	1047 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	TARS	P26639	723 aa	Known RBP	3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	ARID4A	P29374	1257 aa	Predicted RBP	3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	SSTR4	P31391	388 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	TXK	P42681	527 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	SEC13	P55735	322 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	MLLT1	Q03111	559 aa	Predicted RBP	3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	GRIK5	Q16478	980 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	DHX32	Q7L7V1	743 aa	Known RBP	3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	KRTAP19-1	Q8IUB9	90 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	TRPM4	Q8TD43	1214 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	TTC9	Q92623	222 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	POM121	Q96HA1	1249 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	KRTAP9-9	Q9BYP9	154 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	KRTAP9-4	Q9BYQ2	154 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	AKTIP	Q9H8T0	292 aa		3.71	□□□□□ -1.82
GABRB3-222	ENST00000637226	DMGDH	Q9UI17	866 aa	Known RBP	3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms