RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HEG1Q9ULI3 1381 aa8.72□□□□□ -1.01
UPF3B-205ENST00000636792 CHL1O00533 1208 aa8.71□□□□□ -1.02
UPF3B-205ENST00000636792 PLSCR1O15162 318 aa8.71□□□□□ -1.02
UPF3B-205ENST00000636792 ZNF790Q6PG37 636 aa8.71□□□□□ -1.02
UPF3B-205ENST00000636792 TTC5Q8N0Z6 440 aa8.71□□□□□ -1.02
UPF3B-205ENST00000636792 PALLDQ8WX93 1383 aa8.71□□□□□ -1.02
UPF3B-205ENST00000636792 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 PIGBQ92521 554 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
UPF3B-205ENST00000636792 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 TSPYL4Q9UJ04 414 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 NUP188Q5SRE5 1749 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 ERBB4Q15303 1308 aa8.7□□□□□ -1.02
UPF3B-205ENST00000636792 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
UPF3B-205ENST00000636792 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
UPF3B-205ENST00000636792 SLFN5Q08AF3 891 aa8.69□□□□□ -1.02
UPF3B-205ENST00000636792 SF3B2Q13435 895 aaKnown RBP8.69□□□□□ -1.02
UPF3B-205ENST00000636792 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
UPF3B-205ENST00000636792 TRMT2AQ8IZ69 625 aaKnown RBP8.69□□□□□ -1.02
UPF3B-205ENST00000636792 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
UPF3B-205ENST00000636792 PRKD2Q9BZL6 878 aa8.69□□□□□ -1.02
UPF3B-205ENST00000636792 FANCIQ9NVI1 1328 aa8.69□□□□□ -1.02
UPF3B-205ENST00000636792 DPYSL4O14531 572 aa8.68□□□□□ -1.02
UPF3B-205ENST00000636792 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
UPF3B-205ENST00000636792 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
UPF3B-205ENST00000636792 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
UPF3B-205ENST00000636792 BAG6P46379 1132 aa8.67□□□□□ -1.02
UPF3B-205ENST00000636792 EIF4A1P60842 406 aaKnown RBP8.67□□□□□ -1.02
UPF3B-205ENST00000636792 DUSP27Q5VZP5 1158 aa8.67□□□□□ -1.02
UPF3B-205ENST00000636792 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
UPF3B-205ENST00000636792 N4BP2Q86UW6 1770 aaPredicted RBP8.67□□□□□ -1.02
UPF3B-205ENST00000636792 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
UPF3B-205ENST00000636792 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
UPF3B-205ENST00000636792 ATG3Q9NT62 314 aa8.67□□□□□ -1.02
UPF3B-205ENST00000636792 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 LCE2BO14633 110 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 SNRPA1P09661 255 aaKnown RBP8.66□□□□□ -1.02
UPF3B-205ENST00000636792 SIK1P57059 783 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 CAMK2BQ13554 666 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 DDX12PQ92771 950 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
UPF3B-205ENST00000636792 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
UPF3B-205ENST00000636792 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 MAP3K7O43318 606 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 KCNQ2O43526 872 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 TRIM37O94972 964 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 TJAP1Q5JTD0 557 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 ZNF496Q96IT1 587 aaPredicted RBP8.65□□□□□ -1.02
UPF3B-205ENST00000636792 IL21Q9HBE4 155 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 TUBGCP6Q96RT7 1819 aa8.65□□□□□ -1.02
UPF3B-205ENST00000636792 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 C4AP0C0L4 1744 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 GIGYF1O75420 1035 aaPredicted RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 STARD3NLO95772 234 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 APBA3O96018 575 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 TWISTNBQ3B726 338 aaPredicted RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 ALDH1L2Q3SY69 923 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 RC3H1Q5TC82 1133 aaKnown RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
UPF3B-205ENST00000636792 EP400Q96L91 3159 aa8.64□□□□□ -1.03
UPF3B-205ENST00000636792 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 KIF16BQ96L93 1317 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-205ENST00000636792 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-205ENST00000636792 SLC39A6Q13433 755 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 NBR1Q14596 966 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 CCDC30Q5VVM6 783 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 CCNL1Q9UK58 526 aaPredicted RBP8.63□□□□□ -1.03
UPF3B-205ENST00000636792 PXDNLA1KZ92 1463 aa8.63□□□□□ -1.03
UPF3B-205ENST00000636792 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 SAMD7Q7Z3H4 446 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 TSR2Q969E8 191 aaKnown RBP8.62□□□□□ -1.03
UPF3B-205ENST00000636792 CAMKK2Q96RR4 588 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 MTRQ99707 1265 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 DBF4Q9UBU7 674 aaPredicted RBP8.62□□□□□ -1.03
UPF3B-205ENST00000636792 ARFGEF2Q9Y6D5 1785 aa8.62□□□□□ -1.03
UPF3B-205ENST00000636792 IBTKQ9P2D0 1353 aaPredicted RBP8.61□□□□□ -1.03
UPF3B-205ENST00000636792 COL24A1Q17RW2 1714 aa8.61□□□□□ -1.03
UPF3B-205ENST00000636792 PTCD1O75127 700 aaKnown RBP8.61□□□□□ -1.03
UPF3B-205ENST00000636792 CYP19A1P11511 503 aaPredicted RBP8.61□□□□□ -1.03
UPF3B-205ENST00000636792 EXOSC9Q06265 439 aaKnown RBP8.61□□□□□ -1.03
UPF3B-205ENST00000636792 FLAD1Q8NFF5 587 aa8.61□□□□□ -1.03
UPF3B-205ENST00000636792 CDCA7LQ96GN5 454 aa8.61□□□□□ -1.03
UPF3B-205ENST00000636792 VAMP4O75379 141 aa8.6□□□□□ -1.03
UPF3B-205ENST00000636792 SSFA2P28290 1259 aa8.6□□□□□ -1.03
UPF3B-205ENST00000636792 IL6STP40189 918 aaPredicted RBP8.6□□□□□ -1.03
UPF3B-205ENST00000636792 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
UPF3B-205ENST00000636792 ZNF787Q6DD87 383 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms