RNA–Protein interactions for RNA: ENST00000636292.1

CHRNA7-213, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 4,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-213ENST00000636292 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
CHRNA7-213ENST00000636292 TPM3P06753 285 aa16.05■□□□□ 0.16
CHRNA7-213ENST00000636292 TXLNAP40222 546 aa16.05■□□□□ 0.16
CHRNA7-213ENST00000636292 PARP10Q53GL7 1025 aa16.05■□□□□ 0.16
CHRNA7-213ENST00000636292 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 BICC1Q9H694 974 aaKnown RBP16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 CNBD1Q8NA66 436 aa16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 UNC13BO14795 1591 aa16.04■□□□□ 0.16
CHRNA7-213ENST00000636292 USP19O94966 1318 aa16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 HMGB1P09429 215 aaKnown RBP16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 APBA3O96018 575 aa16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 SYNMO15061 1565 aa16.03■□□□□ 0.16
CHRNA7-213ENST00000636292 MBD3O95983 291 aa16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 DCTPP1Q9H773 170 aa16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 KCNQ3O43525 872 aa16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 WASF1Q92558 559 aa16.02■□□□□ 0.16
CHRNA7-213ENST00000636292 SDSP20132 328 aa16.02■□□□□ 0.15
CHRNA7-213ENST00000636292 CCDC83Q8IWF9 413 aa16.02■□□□□ 0.15
CHRNA7-213ENST00000636292 HAND2P61296 217 aa16.02■□□□□ 0.15
CHRNA7-213ENST00000636292 KRT85P78386 507 aa16.02■□□□□ 0.15
CHRNA7-213ENST00000636292 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.15
CHRNA7-213ENST00000636292 C16orf71Q8IYS4 520 aaPredicted RBP16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 ZFYP08048 801 aaPredicted RBP16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 ME1P48163 572 aa16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 CYP7A1P22680 504 aa16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
CHRNA7-213ENST00000636292 ERBB3P21860 1342 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 GSTO1P78417 241 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 OLFM4Q6UX06 510 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 ZGPATQ8N5A5 531 aaKnown RBP16■□□□□ 0.15
CHRNA7-213ENST00000636292 IGSF1Q8N6C5 1336 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 F8W031 263 aaPredicted RBP16■□□□□ 0.15
CHRNA7-213ENST00000636292 ZBTB7BO15156 539 aaPredicted RBP16■□□□□ 0.15
CHRNA7-213ENST00000636292 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
CHRNA7-213ENST00000636292 TFCP2Q12800 502 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 CRNKL1Q9BZJ0 848 aaKnown RBP16■□□□□ 0.15
CHRNA7-213ENST00000636292 RTL1A6NKG5 1358 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 CCDC82Q8N4S0 544 aa16■□□□□ 0.15
CHRNA7-213ENST00000636292 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 TTLL12Q14166 644 aaPredicted RBP15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 SLC12A7Q9Y666 1083 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 DIP2CQ9Y2E4 1556 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 SLC9C2Q5TAH2 1124 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
CHRNA7-213ENST00000636292 TRAK2O60296 914 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 PDE4BQ07343 736 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 NAA16Q6N069 864 aaPredicted RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 SEC63Q9UGP8 760 aaKnown RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 ADGRB3O60242 1522 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 KRT18P05783 430 aaKnown RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 NAT10Q9H0A0 1025 aaKnown RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 ITGA6P23229 1130 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 OGFOD1Q8N543 542 aa15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 SH2B1Q9NRF2 756 aaPredicted RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
CHRNA7-213ENST00000636292 MYO1BO43795 1136 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 MFSD6Q6ZSS7 791 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 TSPY2A6NKD2 308 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 PDE8AO60658 829 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 BAG6P46379 1132 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 FERMT3Q86UX7 667 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 SPHKAPQ2M3C7 1700 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 ADGRL3Q9HAR2 1447 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
CHRNA7-213ENST00000636292 EYA2O00167 538 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 IPO7O95373 1038 aaKnown RBP15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 GCKRQ14397 625 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 PDIA4P13667 645 aaKnown RBP15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 CFAP45Q9UL16 551 aa15.96■□□□□ 0.15
CHRNA7-213ENST00000636292 ZNF76P36508 570 aa15.96■□□□□ 0.14
CHRNA7-213ENST00000636292 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms