RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
CHRNA7-212ENST00000636271 ERVV-1B6SEH8 477 aa19.3■□□□□ 0.68
CHRNA7-212ENST00000636271 SLKQ9H2G2 1235 aaPredicted RBP19.3■□□□□ 0.68
CHRNA7-212ENST00000636271 ANTXR1Q9H6X2 564 aa19.3■□□□□ 0.68
CHRNA7-212ENST00000636271 C9orf78Q9NZ63 289 aaPredicted RBP19.3■□□□□ 0.68
CHRNA7-212ENST00000636271 C4BP0C0L5 1744 aa19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 ISCA1Q9BUE6 129 aa19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 RTCBQ9Y3I0 505 aaKnown RBP19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 LRRFIP2Q9Y608 721 aaKnown RBP19.29■□□□□ 0.68
CHRNA7-212ENST00000636271 APBB1O00213 710 aa19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 GRM8O00222 908 aa19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 SMARCA5O60264 1052 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 AK7Q96M32 723 aa19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 EN1Q05925 392 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
CHRNA7-212ENST00000636271 PHF14O94880 888 aa19.27■□□□□ 0.68
CHRNA7-212ENST00000636271 GPTP24298 496 aa19.27■□□□□ 0.68
CHRNA7-212ENST00000636271 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
CHRNA7-212ENST00000636271 UTYO14607 1347 aa19.27■□□□□ 0.68
CHRNA7-212ENST00000636271 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 A0A087WZG4 1122 aa19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 KAZALD1Q96I82 304 aa19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 CWC25Q9NXE8 425 aaPredicted RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
CHRNA7-212ENST00000636271 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
CHRNA7-212ENST00000636271 HSCBQ8IWL3 235 aa19.25■□□□□ 0.67
CHRNA7-212ENST00000636271 CASP7P55210 303 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 ZNF827Q17R98 1081 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 UBE3BQ7Z3V4 1068 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 ZNF34Q8IZ26 560 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 BCL2L12Q9HB09 334 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 UBN2Q6ZU65 1347 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 HSP90AB3PQ58FF7 597 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 TRAPPC3LQ5T215 181 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 NLRP10Q86W26 655 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 SNX21Q969T3 373 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 NARFQ9UHQ1 456 aa19.24■□□□□ 0.67
CHRNA7-212ENST00000636271 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 H7C1W4 665 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 KIF2CQ99661 725 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 OSBPL3Q9H4L5 887 aa19.23■□□□□ 0.67
CHRNA7-212ENST00000636271 SDSP20132 328 aa19.22■□□□□ 0.67
CHRNA7-212ENST00000636271 EPHA10Q5JZY3 1008 aa19.22■□□□□ 0.67
CHRNA7-212ENST00000636271 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 LRRCC1Q9C099 1032 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 NUP98P52948 1817 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 RFC4P35249 363 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 BICC1Q9H694 974 aaKnown RBP19.21■□□□□ 0.67
CHRNA7-212ENST00000636271 AFDNP55196 1824 aaKnown RBP19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 USP42Q9H9J4 1324 aaKnown RBP19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 ZPR1O75312 459 aa19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 PDE1AP54750 535 aa19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 CASC1Q6TDU7 716 aa19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 SPRYD3Q8NCJ5 442 aa19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 NIP7Q9Y221 180 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHRNA7-212ENST00000636271 ADRA2BP18089 450 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 SSFA2P28290 1259 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 UBR3Q6ZT12 1888 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 BAG6P46379 1132 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 SUSD4Q5VX71 490 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 TBC1D9BQ66K14 1250 aa19.19■□□□□ 0.66
CHRNA7-212ENST00000636271 SALL3Q9BXA9 1300 aa19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 FAM177BA6PVY3 158 aa19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 ZBTB38Q8NAP3 1195 aaPredicted RBP19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 SSH3Q8TE77 659 aa19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 ANO8Q9HCE9 1232 aaPredicted RBP19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
CHRNA7-212ENST00000636271 BCORQ6W2J9 1755 aa19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 SRGAP3O43295 1099 aa19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 MTX1Q13505 466 aa19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 CHMP5Q9NZZ3 219 aa19.17■□□□□ 0.66
CHRNA7-212ENST00000636271 TUBGCP6Q96RT7 1819 aa19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 RGL2O15211 777 aa19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
CHRNA7-212ENST00000636271 FOXO4P98177 505 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms