RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	ANKRD44	Q8N8A2	993 aa		12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	BCL2L12	Q9HB09	334 aa		12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	HDAC5	Q9UQL6	1122 aa		12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	LRRFIP2	Q9Y608	721 aa	Known RBP	12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	UBN2	Q6ZU65	1347 aa		12.02	□□□□□ -0.49
CACNA1A-223	ENST00000636058	COL24A1	Q17RW2	1714 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	QSER1	Q2KHR3	1735 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	ZPR1	O75312	459 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	GPT	P24298	496 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	RFC4	P35249	363 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	DEFB132	Q7Z7B7	95 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	KAZALD1	Q96I82	304 aa		12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	RWDD1	Q9H446	243 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SRP68	Q9UHB9	627 aa	Known RBP	12.01	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PCCA	P05165	728 aa	Predicted RBP	12	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PARP10	Q53GL7	1025 aa		12	□□□□□ -0.49
CACNA1A-223	ENST00000636058	UBE3B	Q7Z3V4	1068 aa		12	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SUCLG2	Q96I99	432 aa		12	□□□□□ -0.49
CACNA1A-223	ENST00000636058	TFCP2L1	Q9NZI6	479 aa		12	□□□□□ -0.49
CACNA1A-223	ENST00000636058	ATP8B2	P98198	1209 aa		11.99	□□□□□ -0.49
CACNA1A-223	ENST00000636058	MTX1	Q13505	466 aa		11.99	□□□□□ -0.49
CACNA1A-223	ENST00000636058	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.99	□□□□□ -0.49
CACNA1A-223	ENST00000636058	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PNPLA7	Q6ZV29	1317 aa		11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	CDHR2	Q9BYE9	1310 aa		11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SUSD4	Q5VX71	490 aa		11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	TBC1D9B	Q66K14	1250 aa		11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	FLAD1	Q8NFF5	587 aa		11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	JARID2	Q92833	1246 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	BICC1	Q9H694	974 aa	Known RBP	11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNA1A-223	ENST00000636058	LAMB2	P55268	1798 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PNMA6E	A0A0J9YXQ4	647 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	HMMR	O75330	724 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	NTSR2	O95665	410 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	GYS1	P13807	737 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	FOXO4	P98177	505 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	POLA2	Q14181	598 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SLC15A2	Q16348	729 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	RABL6	Q3YEC7	729 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	RTL5	Q5HYW3	569 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	EPHA10	Q5JZY3	1008 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	COL23A1	Q86Y22	540 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SMC5	Q8IY18	1101 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SSH3	Q8TE77	659 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	FAM89A	Q96GI7	184 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	UTP14A	Q9BVJ6	771 aa	Known RBP	11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PLA2G12B	Q9BX93	195 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	STK32B	Q9NY57	414 aa		11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	TRMT112	Q9UI30	125 aa	Known RBP	11.97	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SH3TC1	Q8TE82	1336 aa		11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SRGAP3	O43295	1099 aa		11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	PPP1R42	Q7Z4L9	355 aa		11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	GCC1	Q96CN9	775 aa		11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	SETDB2	Q96T68	719 aa		11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	DDX60	Q8IY21	1712 aa	Known RBP	11.96	□□□□□ -0.49
CACNA1A-223	ENST00000636058	CARMIL3	Q8ND23	1372 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NFIX	Q14938	502 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	BICDL1	Q6ZP65	573 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	SYNE4	Q8N205	404 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	DCTPP1	Q9H773	170 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	MYH3	P11055	1940 aa		11.95	□□□□□ -0.5
CACNA1A-223	ENST00000636058	IRS4	O14654	1257 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1A-223	ENST00000636058	FAM177B	A6PVY3	158 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	PDE8A	O60658	829 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	CSF1R	P07333	972 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	TM4SF1	P30408	202 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	LMBR1L	Q6UX01	489 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NYX	Q9GZU5	481 aa		11.93	□□□□□ -0.5
CACNA1A-223	ENST00000636058	MSH5	O43196	834 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	HSP90B1	P14625	803 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	RFX5	P48382	616 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	CTSW	P56202	376 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	ERFE	Q4G0M1	354 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	SLC10A5	Q5PT55	438 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	TPTE2	Q6XPS3	522 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NUTM1	Q86Y26	1132 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NLGN1	Q8N2Q7	840 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NOP58	Q9Y2X3	529 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	CASZ1	Q86V15	1759 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	ABCC12	Q96J65	1359 aa		11.92	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NRXN2	Q9P2S2	1712 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	HCLS1	P14317	486 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	NUCB1	Q02818	461 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	DDR1	Q08345	913 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	TTLL11	Q8NHH1	800 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	COPRS	Q9NQ92	184 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	PDZRN3	Q9UPQ7	1066 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	RIC1	Q4ADV7	1423 aa		11.91	□□□□□ -0.5
CACNA1A-223	ENST00000636058	POLRMT	O00411	1230 aa	Known RBP	11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	SOCS7	O14512	581 aa		11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	SURF6	O75683	361 aa	Known RBP	11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	PTPN12	Q05209	780 aa	Known RBP	11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	EXOC6B	Q9Y2D4	811 aa		11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.9	□□□□□ -0.5
CACNA1A-223	ENST00000636058	RTL9	Q8NET4	1388 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms