RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 CCDC47Q96A33 483 aaKnown RBP16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 ME1P48163 572 aa16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 CTNNA3Q9UI47 895 aa16.91■□□□□ 0.3
NEDD4L-238ENST00000635997 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 VPS72Q15906 364 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 NAPBQ9H115 298 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 IL16Q14005 1332 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 GUCY1B3Q02153 619 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 KDM5CP41229 1560 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 USP5P45974 858 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
NEDD4L-238ENST00000635997 IMMTQ16891 758 aaKnown RBP16.89■□□□□ 0.29
NEDD4L-238ENST00000635997 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
NEDD4L-238ENST00000635997 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
NEDD4L-238ENST00000635997 CCDC125Q86Z20 511 aa16.89■□□□□ 0.29
NEDD4L-238ENST00000635997 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
NEDD4L-238ENST00000635997 GRM8O00222 908 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 CEP89Q96ST8 783 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 HOOK1Q9UJC3 728 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 PDE6BP35913 854 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 TPM1P09493 284 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
NEDD4L-238ENST00000635997 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 ANKRD1Q15327 319 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 NIM1KQ8IY84 436 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
NEDD4L-238ENST00000635997 SLC5A1P13866 664 aa16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 IL13P35225 146 aa16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 EDC4Q6P2E9 1401 aaKnown RBP16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 ZHX3Q9H4I2 956 aa16.86■□□□□ 0.29
NEDD4L-238ENST00000635997 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 A1BGP04217 495 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 TPM2P07951 284 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 FEZ1Q99689 392 aa16.85■□□□□ 0.29
NEDD4L-238ENST00000635997 DPP8Q6V1X1 898 aaPredicted RBP16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 KRT32Q14532 448 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 MMP10P09238 476 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 JAG2Q9Y219 1238 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 H7C1D1 291 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 KRT85P78386 507 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 CCDC144CPQ8IYA2 1237 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
NEDD4L-238ENST00000635997 SDSP20132 328 aa16.83■□□□□ 0.29
NEDD4L-238ENST00000635997 PDILTQ8N807 584 aa16.83■□□□□ 0.29
NEDD4L-238ENST00000635997 TRIM5Q9C035 493 aa16.83■□□□□ 0.29
NEDD4L-238ENST00000635997 IPO7O95373 1038 aaKnown RBP16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 ARHGAP45Q92619 1136 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 PTPRTO14522 1441 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 ZNF213O14771 459 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 PPIP5K2O43314 1243 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 SHROOM2Q13796 1616 aa16.83■□□□□ 0.28
NEDD4L-238ENST00000635997 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 SUPT20HQ8NEM7 779 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 CDK5RAP3Q96JB5 506 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 MBD3O95983 291 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 PARP10Q53GL7 1025 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
NEDD4L-238ENST00000635997 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 GDPD2Q9HCC8 539 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 AGLP35573 1532 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms