RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 ERVV-1B6SEH8 477 aa14.3□□□□□ -0.12
TP53-228ENST00000635293 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■□□□□ 9.5
TP53-228ENST00000635293 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
TP53-228ENST00000635293 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
TP53-228ENST00000635293 C22orf23Q9BZE7 217 aa14.3□□□□□ -0.12
TP53-228ENST00000635293 IL1RAPL2Q9NP60 686 aa14.3□□□□□ -0.12
TP53-228ENST00000635293 CCDC87Q9NVE4 849 aa14.3□□□□□ -0.12
TP53-228ENST00000635293 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
TP53-228ENST00000635293 SCN7AQ01118 1682 aa14.29□□□□□ -0.12
TP53-228ENST00000635293 A0A0G2JS52 829 aa14.29□□□□□ -0.12
TP53-228ENST00000635293 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
TP53-228ENST00000635293 NBR1Q14596 966 aa14.29□□□□□ -0.12
TP53-228ENST00000635293 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
TP53-228ENST00000635293 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
TP53-228ENST00000635293 TRPC5Q9UL62 973 aaPredicted RBP14.29□□□□□ -0.12
TP53-228ENST00000635293 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
TP53-228ENST00000635293 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
TP53-228ENST00000635293 RFX5P48382 616 aaPredicted RBP14.28□□□□□ -0.12
TP53-228ENST00000635293 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
TP53-228ENST00000635293 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
TP53-228ENST00000635293 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
TP53-228ENST00000635293 TAF1LQ8IZX4 1826 aa14.28□□□□□ -0.12
TP53-228ENST00000635293 FOXO4P98177 505 aa14.27□□□□□ -0.12
TP53-228ENST00000635293 PLA2G12BQ9BX93 195 aa14.27□□□□□ -0.12
TP53-228ENST00000635293 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
TP53-228ENST00000635293 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.13
TP53-228ENST00000635293 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
TP53-228ENST00000635293 NUTM1Q86Y26 1132 aa14.27□□□□□ -0.13
TP53-228ENST00000635293 ERC2O15083 957 aa14.26□□□□□ -0.13
TP53-228ENST00000635293 ITPK1Q13572 414 aa14.26□□□□□ -0.13
TP53-228ENST00000635293 BECN1Q14457 450 aa14.26□□□□□ -0.13
TP53-228ENST00000635293 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
TP53-228ENST00000635293 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
TP53-228ENST00000635293 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
TP53-228ENST00000635293 KCNQ2O43526 872 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 ONECUT3O60422 494 aaPredicted RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 GLRX3O76003 335 aaKnown RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 SASH1O94885 1247 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 IFIT2P09913 472 aaKnown RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 REC8O95072 547 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 JARID2Q92833 1246 aaPredicted RBP14.25□□□□□ -0.13
TP53-228ENST00000635293 ECHDC1Q9NTX5 307 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 CNTNAP4Q9C0A0 1308 aa14.25□□□□□ -0.13
TP53-228ENST00000635293 LRP5O75197 1615 aa14.24□□□□□ -0.13
TP53-228ENST00000635293 RGL2O15211 777 aa14.24□□□□□ -0.13
TP53-228ENST00000635293 RTL5Q5HYW3 569 aaPredicted RBP14.24□□□□□ -0.13
TP53-228ENST00000635293 TSHZ3Q63HK5 1081 aa14.24□□□□□ -0.13
TP53-228ENST00000635293 AACSQ86V21 672 aa14.24□□□□□ -0.13
TP53-228ENST00000635293 NLRP10Q86W26 655 aa14.24□□□□□ -0.13
TP53-228ENST00000635293 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 SIL1Q9H173 461 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 DDX60Q8IY21 1712 aaKnown RBP14.23□□□□□ -0.13
TP53-228ENST00000635293 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 HLFQ16534 295 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 ARXQ96QS3 562 aa14.23□□□□□ -0.13
TP53-228ENST00000635293 CIAO1O76071 339 aa14.22□□□□□ -0.13
TP53-228ENST00000635293 KLHDC4Q8TBB5 520 aa14.22□□□□□ -0.13
TP53-228ENST00000635293 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
TP53-228ENST00000635293 COL24A1Q17RW2 1714 aa14.21□□□□□ -0.13
TP53-228ENST00000635293 AK7Q96M32 723 aa14.21□□□□□ -0.13
TP53-228ENST00000635293 GPR108Q9NPR9 543 aa14.21□□□□□ -0.13
TP53-228ENST00000635293 SPEF2Q9C093 1822 aa14.21□□□□□ -0.13
TP53-228ENST00000635293 ZNF609O15014 1411 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.14
TP53-228ENST00000635293 CAMTA2O94983 1202 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 CHMLP26374 656 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 IL15P40933 162 aaPredicted RBP14.21□□□□□ -0.14
TP53-228ENST00000635293 PARP10Q53GL7 1025 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 RILPL2Q969X0 211 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.14
TP53-228ENST00000635293 TBC1D2BQ9UPU7 963 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.14
TP53-228ENST00000635293 CASZ1Q86V15 1759 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 C4BP0C0L5 1744 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 CSF1RP07333 972 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 GPTP24298 496 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
TP53-228ENST00000635293 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
TP53-228ENST00000635293 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 EYA2O00167 538 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 DEKP35659 375 aaKnown RBP14.19□□□□□ -0.14
TP53-228ENST00000635293 CCDC57Q2TAC2 916 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 USP26Q9BXU7 913 aa14.19□□□□□ -0.14
TP53-228ENST00000635293 HSP90B1P14625 803 aaKnown RBP14.18□□□□□ -0.14
TP53-228ENST00000635293 TFCP2Q12800 502 aa14.18□□□□□ -0.14
TP53-228ENST00000635293 TRMT112Q9UI30 125 aaKnown RBP14.18□□□□□ -0.14
TP53-228ENST00000635293 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
TP53-228ENST00000635293 RFX7Q2KHR2 1363 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms